UBA52

Functionⁱ

GO - Molecular functionⁱ

structural constituent of ribosome Source: InterPro

Complete GO annotation...

GO - Biological processⁱ

translation Source: InterPro

Complete GO annotation...

Keywordsⁱ

Molecular function	Ribonucleoprotein, Ribosomal proteinImported

Molecular function

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Ubiquitin-60S ribosomal protein L40Imported Submitted name: Ubiquitin-ribosomal protein fusion proteinImported
Gene namesⁱ	Name:UBA52Imported
Organismⁱ	Gallus gallus (Chicken)Imported
Taxonomic identifierⁱ	9031 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Sauropsida › Sauria › Archelosauria › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galloanserae › Galliformes › Phasianidae › Phasianinae › Gallus
Proteomesⁱ	UP000000539 Componentⁱ: Chromosome 28

Subcellular locationⁱ

GO - Cellular componentⁱ

cytosol Source: Ensembl
endoplasmic reticulum Source: Ensembl
extracellular exosome Source: Ensembl
extracellular space Source: Ensembl
lysosomal membrane Source: Ensembl
nucleoplasm Source: Ensembl
plasma membrane Source: Ensembl
ribosome Source: UniProtKB-KW

Complete GO annotation...

PTM / Processingⁱ

Proteomic databases

PaxDbⁱ	O42388.
PRIDEⁱ	O42388.

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	9031.ENSGALP00000004703.

STRINGⁱ

9031.ENSGALP00000004703.

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	1 – 76	Ubiquitin-likeInterPro annotationAdd BLAST		76

Phylogenomic databases

eggNOGⁱ	KOG0001. Eukaryota. COG5272. LUCA.
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00870000136502.
HOVERGENⁱ	HBG052927.
KEGG Orthology (KO) More...KOⁱ	K02927.

Family and domain databases

InterProⁱ	View protein in InterPro IPR001975. Ribosomal_L40e. IPR019956. Ubiquitin. IPR029071. Ubiquitin-rel_dom. IPR019954. Ubiquitin_CS. IPR000626. Ubiquitin_dom.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF01020. Ribosomal_L40e. 1 hit. PF00240. ubiquitin. 1 hit.
PRINTSⁱ	PR00348. UBIQUITIN.
SMARTⁱ	View protein in SMART SM01377. Ribosomal_L40e. 1 hit. SM00213. UBQ. 1 hit.
SUPFAMⁱ	SSF54236. SSF54236. 1 hit.
PROSITEⁱ	View protein in PROSITE PS00299. UBIQUITIN_1. 1 hit. PS50053. UBIQUITIN_2. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

O42388-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MQIFVKTLTG KTITLEVEPN DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL 
        60         70         80         90        100
EDGRTLADYN IQKESTLHLV LRLRGGIIEP SLRQLAQKYN CDKMICRKCY 
       110        120 
ARLHPRAVNC RKKKCGHTNN LRPKKKVK

Length:128

Mass (Da):14,739

Last modified:January 1, 1998 - v1

Checksum:ⁱ0C7CD4AF4F6B72B8

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AADN04000369 Genomic DNA. No translation available. Z29958 mRNA. Translation: CAA82846.1.
PIRⁱ	S01884.
NCBI Reference Sequences More...RefSeqⁱ	NP_990406.1. NM_205075.1.
UniGeneⁱ	Gga.569.

Genome annotation databases

Ensemblⁱ	ENSGALT00000046741; ENSGALP00000053207; ENSGALG00000037716.
GeneIDⁱ	395958.
KEGGⁱ	gga:395958.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AADN04000369 Genomic DNA. No translation available. Z29958 mRNA. Translation: CAA82846.1.
PIRⁱ	S01884.
NCBI Reference Sequences More...RefSeqⁱ	NP_990406.1. NM_205075.1.
UniGeneⁱ	Gga.569.

3D structure databases

ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	9031.ENSGALP00000004703.

STRINGⁱ

9031.ENSGALP00000004703.

Proteomic databases

PaxDbⁱ	O42388.
PRIDEⁱ	O42388.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

Ensemblⁱ	ENSGALT00000046741; ENSGALP00000053207; ENSGALG00000037716.
GeneIDⁱ	395958.
KEGGⁱ	gga:395958.

Organism-specific databases

CTDⁱ	7311.

CTDⁱ

7311.

Phylogenomic databases

eggNOGⁱ	KOG0001. Eukaryota. COG5272. LUCA.
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00870000136502.
HOVERGENⁱ	HBG052927.
KEGG Orthology (KO) More...KOⁱ	K02927.

Family and domain databases

InterProⁱ	View protein in InterPro IPR001975. Ribosomal_L40e. IPR019956. Ubiquitin. IPR029071. Ubiquitin-rel_dom. IPR019954. Ubiquitin_CS. IPR000626. Ubiquitin_dom.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF01020. Ribosomal_L40e. 1 hit. PF00240. ubiquitin. 1 hit.
PRINTSⁱ	PR00348. UBIQUITIN.
SMARTⁱ	View protein in SMART SM01377. Ribosomal_L40e. 1 hit. SM00213. UBQ. 1 hit.
SUPFAMⁱ	SSF54236. SSF54236. 1 hit.
PROSITEⁱ	View protein in PROSITE PS00299. UBIQUITIN_1. 1 hit. PS50053. UBIQUITIN_2. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	O42388_CHICK
Accessionⁱ	O42388Primary (citable) accession number: O42388
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	January 1, 1998
	Last sequence update:	January 1, 1998
	Last modified:	May 10, 2017
	This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

UniProtKB - O42388 (O42388_CHICK)

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Ubiquitin-60S ribosomal protein L40

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Keywordsⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

GO - Cellular componentⁱ

PTM / Processingⁱ

Proteomic databases

Interactionⁱ

Protein-protein interaction databases

Family & Domainsⁱ

Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

Similar proteinsⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - O42388 (O42388_CHICK)

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Ubiquitin-60S ribosomal protein L40

UBA52

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Cellular componenti

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Phylogenomic databases

Family and domain databases

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

GO - Cellular componentⁱ

PTM / Processingⁱ

Interactionⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ