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Protein
Submitted name:

Rabaptin-5

Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Rabaptin-5Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiO42351.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000039547.

Structurei

3D structure databases

ProteinModelPortaliO42351.
SMRiO42351. Positions 551-638, 800-852.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini11 – 493483RabaptinInterPro annotationAdd
BLAST
Domaini531 – 837307Rab5-bindInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili18 – 9174Sequence analysisAdd
BLAST
Coiled coili133 – 22290Sequence analysisAdd
BLAST
Coiled coili238 – 28649Sequence analysisAdd
BLAST
Coiled coili548 – 58942Sequence analysisAdd
BLAST
Coiled coili608 – 65346Sequence analysisAdd
BLAST
Coiled coili729 – 80880Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0993. Eukaryota.
ENOG410XSZ1. LUCA.
HOGENOMiHOG000234329.
HOVERGENiHBG055335.
KOiK12480.
PhylomeDBiO42351.

Family and domain databases

InterProiIPR003914. Rabaptin.
IPR029880. Rabaptin-5.
IPR018514. Rabaptin_coiled-coil.
IPR015390. Rabaptin_Rab5-bd_dom.
[Graphical view]
PANTHERiPTHR31179:SF5. PTHR31179:SF5. 2 hits.
PfamiPF09311. Rab5-bind. 1 hit.
PF03528. Rabaptin. 1 hit.
[Graphical view]
PRINTSiPR01432. RABAPTIN.

Sequencei

Sequence statusi: Complete.

O42351-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQPGPSAPT DVALLQRVAE LEKVNAEFLR TKQQLEQEFN QKRAKFKELY
60 70 80 90 100
LAKEEDLKRQ NAVLQAAQDD LGQLRTQLME AHAEMENIKA IATVSENTKQ
110 120 130 140 150
EAIDEVKRQW QEEVASLQAI MKETVRDYEL QYHHRMEQER AQWNQYRENV
160 170 180 190 200
EREIAELRRR LSEAQEEENL ENEMKKAQED AEKLRSVVMP MEKEIAALKE
210 220 230 240 250
KLIEAEEKIK ELEASKVKEL NHYLEAEKSC RTDLEMYVAV LNTQKSVLQE
260 270 280 290 300
DAEKLRKELH EVCHLLEQER QQHNQLKHTW QKANDQFLES QRLLMRDMQR
310 320 330 340 350
MEIVLTSEQL RQVEELKKKD QEEDDQQRLS KRKEQKQKDS DDETKASCSL
360 370 380 390 400
AHEESLTQFS NEEVHLNSTH SSVHSLDADL LLSSGESFNK SENDMFKDGL
410 420 430 440 450
RRAQSTDSLG TSGSLQSKAL GYNNKAKSAG NLDESDFGPL VGADSVSENY
460 470 480 490 500
DTASLGSLQM PSGFMLTKDQ EKAIKAMTPE QEETASLLSS VTQGVESAYV
510 520 530 540 550
SPSGYRLVSE TEWNLLQKEV QNAGNKLGRR CDMCSNYEKQ LQGIQIQEAE
560 570 580 590 600
TRDQVKKLQV MLRQANDQLE KTMKDKQELE EYMKQSAEDS SNQISLLMVK
610 620 630 640 650
CQKSENFLNE LQQAFSQAKR SVQEQMAVLT QSREQVSEEL VRLQKDNESL
660 670 680 690 700
QGKHSLHVSL QQAEDFILPE AAEELRELIL KYREDIISVR TAADHLEEKL
710 720 730 740 750
KAEILFLKEQ IQAEQYLQEN IEETLQLEIE NCKEEIASIS SLKAELERIK
760 770 780 790 800
VEKEQLESSS QEYLQQLESL QETKNTLEEQ LKKETAAKAN LEQLVFEEKN
810 820 830 840 850
KAQRLQTELD VSEQVQRDFV KLSQTLQVQL ERIRQADSLE RIRAILNDTK
860
LTDINQLPET
Length:860
Mass (Da):99,414
Last modified:January 1, 1998 - v1
Checksum:i202FCF2CA845B2BE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D88828 mRNA. Translation: BAA21785.1.
RefSeqiNP_990388.1. NM_205057.1.
UniGeneiGga.549.

Genome annotation databases

GeneIDi395930.
KEGGigga:395930.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D88828 mRNA. Translation: BAA21785.1.
RefSeqiNP_990388.1. NM_205057.1.
UniGeneiGga.549.

3D structure databases

ProteinModelPortaliO42351.
SMRiO42351. Positions 551-638, 800-852.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000039547.

Proteomic databases

PaxDbiO42351.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi395930.
KEGGigga:395930.

Organism-specific databases

CTDi9135.

Phylogenomic databases

eggNOGiKOG0993. Eukaryota.
ENOG410XSZ1. LUCA.
HOGENOMiHOG000234329.
HOVERGENiHBG055335.
KOiK12480.
PhylomeDBiO42351.

Family and domain databases

InterProiIPR003914. Rabaptin.
IPR029880. Rabaptin-5.
IPR018514. Rabaptin_coiled-coil.
IPR015390. Rabaptin_Rab5-bd_dom.
[Graphical view]
PANTHERiPTHR31179:SF5. PTHR31179:SF5. 2 hits.
PfamiPF09311. Rab5-bind. 1 hit.
PF03528. Rabaptin. 1 hit.
[Graphical view]
PRINTSiPR01432. RABAPTIN.
ProtoNetiSearch...

Publicationsi

  1. "Gallus gallus rabaptin-5."
    Nogawa M., Uyeda A., Nishimune H., Taguchi T.
    Submitted (NOV-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiO42351_CHICK
AccessioniPrimary (citable) accession number: O42351
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: June 8, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.