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Protein
Submitted name:

PAX7 protein

Gene

Pax-7

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi215 – 274HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental proteinPROSITE-ProRule annotationSAAS annotation, DNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
PAX7 proteinImported
Submitted name:
Paired box 7Imported
Gene namesi
Name:Pax-7Imported
Synonyms:PAX7Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Chromosome 21

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSGALG00000003782

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000005992

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 161PairedInterPro annotationAdd BLAST128
Domaini213 – 273HomeoboxInterPro annotationAdd BLAST61
Domaini498 – 510OARInterPro annotationAdd BLAST13

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi498 – 510OARPROSITE-ProRule annotationAdd BLAST13

Sequence similaritiesi

Belongs to the paired homeobox family.SAAS annotation

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotation, Paired boxPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0849 Eukaryota
ENOG410XS01 LUCA
GeneTreeiENSGT00680000099553
HOGENOMiHOG000230939
HOVERGENiHBG009115
KOiK09381
OMAiGTVPRMV
OrthoDBiEOG091G0S4E
TreeFamiTF351610

Family and domain databases

CDDicd00086 homeodomain, 1 hit
cd00131 PAX, 1 hit
Gene3Di1.10.10.102 hits
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR003654 OAR_dom
IPR001523 Paired_dom
IPR022106 Pax7_C
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF00046 Homeobox, 1 hit
PF00292 PAX, 1 hit
PF12360 Pax7, 1 hit
PRINTSiPR00027 PAIREDBOX
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SM00351 PAX, 1 hit
SUPFAMiSSF46689 SSF46689, 2 hits
PROSITEiView protein in PROSITE
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit
PS50803 OAR, 1 hit
PS00034 PAIRED_1, 1 hit
PS51057 PAIRED_2, 1 hit

Sequencei

Sequence statusi: Complete.

O42349-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAALPGTVPR MMRPAPGQNY PRTGFPLEVS TPLGQGRVNQ LGGVFINGRP
60 70 80 90 100
LPNHIRHKIV EMAHHGIRPC VISRQLRVSH GCVSKILCRY QETGSIRPGA
110 120 130 140 150
IGGSKPRQVA TPDVEKKIEE YKRENPGMFS WEIRDRLLKD GHCDRSTVPS
160 170 180 190 200
VSSISRVLRI KFGKKEEEED CDKKEEDGEK KAKHSIDGIL GDKGNRLDEG
210 220 230 240 250
SDVESEPDLP LKRKQRRSRT TFTAEQLEEL EKAFERTHYP DIYTREELAQ
260 270 280 290 300
RTKLTEARVQ VWFSNRRARW RKQAGANQLA AFNHLLPGGF PPTGMPTLPP
310 320 330 340 350
YQLPDSTYPT TTISQDGGST VHRPQPLPPS TMHQGGLAAA AAADSSSAYG
360 370 380 390 400
ARHSFSSYSD SFMNAAAPAN HMNPVSNGLS PQKQGAQNKM QCSRWNLTIA
410 420 430 440 450
LNNQVMSILS NPSGVPPQPQ ADFSISPLHG GLDTTNSISA SCSQRSDSIK
460 470 480 490 500
SVDSLPTSQS YCPPTYSTTS YSVDPVAGYQ YGQYGQTAVD YLTKNVSLST
510 520
QRRMKLGEHS AVLGLLPVET GQAY
Length:524
Mass (Da):57,594
Last modified:January 1, 1998 - v1
Checksum:iB1F910F74A2DF5C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000180 Genomic DNA No translation available.
D87838 mRNA Translation: BAA23005.1
RefSeqiNP_990396.1, NM_205065.1
UniGeneiGga.555

Genome annotation databases

EnsembliENSGALT00000048594; ENSGALP00000044020; ENSGALG00000043204
GeneIDi395942
KEGGigga:395942

Similar proteinsi

Entry informationi

Entry nameiO42349_CHICK
AccessioniPrimary (citable) accession number: O42349
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: April 25, 2018
This is version 150 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported