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Protein
Submitted name:

PAX7 protein

Gene

Pax-7

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Developmental proteinUniRule annotationSAAS annotation

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
PAX7 proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Pax-7Imported
Synonyms:PAX7Imported
OrganismiGallus gallus (Chicken)
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Chromosome 21

Subcellular locationi

  • Nucleus UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSGALG00000003782.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000005992.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 161PairedInterPro annotationAdd BLAST128
Domaini213 – 273Homeobox DNA-bindingInterPro annotationAdd BLAST61
Domaini498 – 510OARInterPro annotationAdd BLAST13

Sequence similaritiesi

Belongs to the paired homeobox family.SAAS annotation
Contains 1 paired domain.UniRule annotation

Keywords - Domaini

HomeoboxUniRule annotationSAAS annotation, Paired boxUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0849. Eukaryota.
ENOG410XS01. LUCA.
GeneTreeiENSGT00680000099553.
HOGENOMiHOG000230939.
HOVERGENiHBG009115.
KOiK09381.
OMAiGTVPRMV.
OrthoDBiEOG091G0S4E.
TreeFamiTF351610.

Family and domain databases

CDDicd00131. PAX. 1 hit.
Gene3Di1.10.10.10. 2 hits.
1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR003654. OAR_dom.
IPR001523. Paired_dom.
IPR022106. Pax7_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
PF00292. PAX. 1 hit.
PF12360. Pax7. 1 hit.
[Graphical view]
PRINTSiPR00027. PAIREDBOX.
SMARTiSM00389. HOX. 1 hit.
SM00351. PAX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 2 hits.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS50803. OAR. 1 hit.
PS00034. PAIRED_1. 1 hit.
PS51057. PAIRED_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O42349-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAALPGTVPR MMRPAPGQNY PRTGFPLEVS TPLGQGRVNQ LGGVFINGRP
60 70 80 90 100
LPNHIRHKIV EMAHHGIRPC VISRQLRVSH GCVSKILCRY QETGSIRPGA
110 120 130 140 150
IGGSKPRQVA TPDVEKKIEE YKRENPGMFS WEIRDRLLKD GHCDRSTVPS
160 170 180 190 200
VSSISRVLRI KFGKKEEEED CDKKEEDGEK KAKHSIDGIL GDKGNRLDEG
210 220 230 240 250
SDVESEPDLP LKRKQRRSRT TFTAEQLEEL EKAFERTHYP DIYTREELAQ
260 270 280 290 300
RTKLTEARVQ VWFSNRRARW RKQAGANQLA AFNHLLPGGF PPTGMPTLPP
310 320 330 340 350
YQLPDSTYPT TTISQDGGST VHRPQPLPPS TMHQGGLAAA AAADSSSAYG
360 370 380 390 400
ARHSFSSYSD SFMNAAAPAN HMNPVSNGLS PQKQGAQNKM QCSRWNLTIA
410 420 430 440 450
LNNQVMSILS NPSGVPPQPQ ADFSISPLHG GLDTTNSISA SCSQRSDSIK
460 470 480 490 500
SVDSLPTSQS YCPPTYSTTS YSVDPVAGYQ YGQYGQTAVD YLTKNVSLST
510 520
QRRMKLGEHS AVLGLLPVET GQAY
Length:524
Mass (Da):57,594
Last modified:January 1, 1998 - v1
Checksum:iB1F910F74A2DF5C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000180 Genomic DNA. No translation available.
D87838 mRNA. Translation: BAA23005.1.
RefSeqiNP_990396.1. NM_205065.1.
UniGeneiGga.555.

Genome annotation databases

EnsembliENSGALT00000048594; ENSGALP00000044020; ENSGALG00000043204.
GeneIDi395942.
KEGGigga:395942.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000180 Genomic DNA. No translation available.
D87838 mRNA. Translation: BAA23005.1.
RefSeqiNP_990396.1. NM_205065.1.
UniGeneiGga.555.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000005992.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSGALT00000048594; ENSGALP00000044020; ENSGALG00000043204.
GeneIDi395942.
KEGGigga:395942.

Organism-specific databases

CTDi5081.

Phylogenomic databases

eggNOGiKOG0849. Eukaryota.
ENOG410XS01. LUCA.
GeneTreeiENSGT00680000099553.
HOGENOMiHOG000230939.
HOVERGENiHBG009115.
KOiK09381.
OMAiGTVPRMV.
OrthoDBiEOG091G0S4E.
TreeFamiTF351610.

Gene expression databases

BgeeiENSGALG00000003782.

Family and domain databases

CDDicd00131. PAX. 1 hit.
Gene3Di1.10.10.10. 2 hits.
1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR003654. OAR_dom.
IPR001523. Paired_dom.
IPR022106. Pax7_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
PF00292. PAX. 1 hit.
PF12360. Pax7. 1 hit.
[Graphical view]
PRINTSiPR00027. PAIREDBOX.
SMARTiSM00389. HOX. 1 hit.
SM00351. PAX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 2 hits.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS50803. OAR. 1 hit.
PS00034. PAIRED_1. 1 hit.
PS51057. PAIRED_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO42349_CHICK
AccessioniPrimary (citable) accession number: O42349
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: November 30, 2016
This is version 136 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.