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Protein
Submitted name:

Odorant receptor 2.5

Gene

or111-6

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorSAAS annotation, Receptor, Transducer

Keywords - Biological processi

OlfactionSAAS annotation, Sensory transduction

Names & Taxonomyi

Protein namesi
Submitted name:
Odorant receptor 2.5Imported
Submitted name:
Olfactory receptor protein 2.5Imported
Gene namesi
Name:or111-6Imported
Synonyms:OR 2.5Imported, or2.5Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-010308-14. or111-6.

Subcellular locationi

  • Cell membrane SAAS annotation; Multi-pass membrane protein SAAS annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei33 – 5523HelicalSequence analysisAdd
BLAST
Transmembranei67 – 8519HelicalSequence analysisAdd
BLAST
Transmembranei105 – 12723HelicalSequence analysisAdd
BLAST
Transmembranei148 – 17023HelicalSequence analysisAdd
BLAST
Transmembranei207 – 23226HelicalSequence analysisAdd
BLAST
Transmembranei252 – 27221HelicalSequence analysisAdd
BLAST
Transmembranei278 – 30023HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membraneSAAS annotation, Membrane

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000060116.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini48 – 298251G_PROTEIN_RECEP_F1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG410IKEE. Eukaryota.
ENOG411157D. LUCA.
HOGENOMiHOG000041363.
HOVERGENiHBG017625.
KOiK04257.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O42169-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNFLNESFYQ NISFVHPQYF YIIGLSGTPY SSYFYVFLFI TYFITLFGNS
60 70 80 90 100
VVLLIIALDR SLHSPKYIGV FNLALADIGE TNALIPNMVK TFLFDSQYIS
110 120 130 140 150
YNACLANMFF VFLFSSIQSF ALLVLAFDRF VAICLPLRYH ALVNNTTMLL
160 170 180 190 200
AFAAVWAFNS FVVALMVSLI TRLSFCQSNM IQSYFCDHGP VYRIACNDFS
210 220 230 240 250
INKFMAFLIT GLYLVIPLFL IVLSYLGIFL ALTKITTFEG RIKALKTCVS
260 270 280 290 300
HLLLVGTLFL PLFCTYFAQL LLSLSPNARV ICTSLAYTIP PMLNPIIYVL
310 320
NTAEIKDIIW KVFKNKSVAV ESISK
Length:325
Mass (Da):36,843
Last modified:January 1, 1998 - v1
Checksum:iDBB50B6B6C7B0A2F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF012759 Genomic DNA. Translation: AAC60267.1.
AF112374 Genomic DNA. Translation: AAF27270.1.
RefSeqiNP_571821.1. NM_131746.1.
UniGeneiDr.88304.

Genome annotation databases

GeneIDi80364.
KEGGidre:80364.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF012759 Genomic DNA. Translation: AAC60267.1.
AF112374 Genomic DNA. Translation: AAF27270.1.
RefSeqiNP_571821.1. NM_131746.1.
UniGeneiDr.88304.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000060116.

Protein family/group databases

GPCRDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi80364.
KEGGidre:80364.

Organism-specific databases

CTDi80364.
ZFINiZDB-GENE-010308-14. or111-6.

Phylogenomic databases

eggNOGiENOG410IKEE. Eukaryota.
ENOG411157D. LUCA.
HOGENOMiHOG000041363.
HOVERGENiHBG017625.
KOiK04257.

Miscellaneous databases

NextBioi20934070.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Noncoordinate expression of odorant receptor genes tightly linked in the zebrafish genome."
    Barth A.L., Dugas J.C., Ngai J.
    Neuron 19:359-369(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ABImported.
  2. "Analysis and characterization of an odorant receptor gene cluster in the zebrafish genome."
    Dugas J.C., Ngai J.
    Genomics 71:53-65(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ABImported.

Entry informationi

Entry nameiO42169_DANRE
AccessioniPrimary (citable) accession number: O42169
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: May 11, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.