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O41178

- NSP1_ROTPY

UniProt

O41178 - NSP1_ROTPY

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Protein

Non-structural protein 1

Gene
N/A
Organism
Rotavirus A (strain Pig/Mexico/YM/1983 G11-P9[7]-I5-R1-C1-M1-A8-N1-T1-E1-H1) (RV-A)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Seems to induce the proteasome-dependent degradation of IRF3, IRF5 and IRF7, thereby antagonizing the cellular interferon response and establishment of the antiviral state. Binds and targets IRF3 early post-infection and suppresses IRF3 nuclear translocation (By similarity).By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri42 – 7938Sequence AnalysisAdd
BLAST

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. RNA binding Source: UniProtKB-KW

GO - Biological processi

  1. suppression by virus of host IRF3 activity Source: UniProtKB-KW
  2. suppression by virus of host IRF7 activity Source: UniProtKB-KW
  3. suppression by virus of host NF-kappaB transcription factor activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Host-virus interaction, Inhibition of host innate immune response by virus, Inhibition of host IRF3 by virus, Inhibition of host IRF7 by virus, Inhibition of host NF-kappa-B by virus, Inhibition of host RLR pathway by virus, Interferon antiviral system evasion, Viral immunoevasion

Keywords - Ligandi

Metal-binding, RNA-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein 1
Short name:
NSP1
Alternative name(s):
NCVP2
Non-structural RNA-binding protein 53
Short name:
NS53
OrganismiRotavirus A (strain Pig/Mexico/YM/1983 G11-P9[7]-I5-R1-C1-M1-A8-N1-T1-E1-H1) (RV-A)
Taxonomic identifieri10919 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirus
Virus hostiSus scrofa (Pig) [TaxID: 9823]

Subcellular locationi

GO - Cellular componenti

  1. host cell cytoplasm Source: UniProtKB-KW
  2. host cytoskeleton Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Host cytoplasm, Host cytoskeleton

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 486486Non-structural protein 1PRO_0000369091Add
BLAST

Interactioni

Subunit structurei

Interacts (via C-terminus) with host IRF3; this interaction leads to IRF3 degradation. Interacts with host IRF7; this interaction leads to IRF7 degradation (By similarity).By similarity

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni1 – 8181RNA-bindingBy similarityAdd
BLAST
Regioni82 – 17695Important for cytoskeleton localizationBy similarityAdd
BLAST
Regioni313 – 486174Interaction with IRF3By similarityAdd
BLAST

Domaini

The zinc-finger domain is important, but not sufficient for binding and degrading IRF3. It is sometimes described as a RING zinc-finger, but it is atypical and it is unclear whether it is related with ubiquitin ligase activity (By similarity).By similarity

Sequence similaritiesi

Belongs to the rotavirus A NSP1 family.Curated

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri42 – 7938Sequence AnalysisAdd
BLAST

Keywords - Domaini

Zinc-finger

Family and domain databases

InterProiIPR002148. Rotavirus_NSP1.
[Graphical view]
PfamiPF00981. Rota_NS53. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O41178-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATFKDACYH YKRLNKLNHA VLKLGVNDAW RPSPPTKYKG WCLDCCQHTD
60 70 80 90 100
LTYCRGCSIY HVCQWCNQYG RCFLDDEPHL LRMRTFKNDI TKEDLANLID
110 120 130 140 150
MYNVLFPVNQ KIVNKFINNT KQHKCRNELV PQWYNHLLMP ITLQSLSIEL
160 170 180 190 200
SGDIYYIFGY YDDMKNVNQT PFSFVNLIDI YDRLLLDDVN FNRMSFLPLV
210 220 230 240 250
LQQEYAIRYF SKSRFISEEK RQINHSHFSI NILENLHNPN FKIQITRNCS
260 270 280 290 300
TMFGKWNEAC TLVKDIGTYF EILKTSHVEF YDVSPRCRMF TQHKLKAVSK
310 320 330 340 350
VIKPNYATSN HRALATEVYN CRWCSVNTSF IVWNDFRLRN ICDNVLNFIR
360 370 380 390 400
ALVKSNTRIG HCSSQEQIHS YIRDVFDVCD ENKWNTSVSG IFNCLESVEL
410 420 430 440 450
DGVHYVLLNH EVNWDVANVL IQNIGKIPQI LTLNDVITAL HSMIYDWFDI
460 470 480
RYMRNTPTTT FTVDKLRQLC ARRKIADYDS GLSDVE
Length:486
Mass (Da):57,276
Last modified:January 1, 1998 - v1
Checksum:i20562AFA40C501BF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D38154 Genomic RNA. Translation: BAA20545.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D38154 Genomic RNA. Translation: BAA20545.1 .

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR002148. Rotavirus_NSP1.
[Graphical view ]
Pfami PF00981. Rota_NS53. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Species-specific and interspecies relatedness of NSP1 sequences in human, porcine, bovine, feline, and equine rotavirus strains."
    Kojima K., Taniguchi K., Kobayashi N.
    Arch. Virol. 141:1-12(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNSP1_ROTPY
AccessioniPrimary (citable) accession number: O41178
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: January 1, 1998
Last modified: October 29, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3