##gff-version 3 O41174 UniProtKB Initiator methionine 1 1 . . . Note=Removed%3B by host;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Chain 2 2168 . . . ID=PRO_0000426581;Note=Genome polyprotein O41174 UniProtKB Chain 2 835 . . . ID=PRO_0000426582;Note=P1 O41174 UniProtKB Chain 2 315 . . . ID=PRO_0000426583;Note=Capsid protein VP0 O41174 UniProtKB Chain 2 69 . . . ID=PRO_0000426584;Note=Capsid protein VP4 O41174 UniProtKB Chain 70 315 . . . ID=PRO_0000426585;Note=Capsid protein VP2 O41174 UniProtKB Chain 316 548 . . . ID=PRO_0000426586;Note=Capsid protein VP3 O41174 UniProtKB Chain 549 835 . . . ID=PRO_0000426587;Note=Capsid protein VP1 O41174 UniProtKB Chain 836 1413 . . . ID=PRO_0000426588;Note=P2 O41174 UniProtKB Chain 836 985 . . . ID=PRO_0000426589;Note=Protease 2A O41174 UniProtKB Chain 986 1084 . . . ID=PRO_0000040063;Note=Protein 2B O41174 UniProtKB Chain 1085 1413 . . . ID=PRO_0000040064;Note=Protein 2C O41174 UniProtKB Chain 1414 2168 . . . ID=PRO_0000426590;Note=P3 O41174 UniProtKB Chain 1414 1524 . . . ID=PRO_0000426591;Note=Protein 3AB O41174 UniProtKB Chain 1414 1502 . . . ID=PRO_0000040065;Note=Protein 3A O41174 UniProtKB Chain 1503 1524 . . . ID=PRO_0000426592;Note=Viral protein genome-linked O41174 UniProtKB Chain 1525 2168 . . . ID=PRO_0000426593;Note=Protein 3CD O41174 UniProtKB Chain 1525 1707 . . . ID=PRO_0000426594;Note=Protease 3C O41174 UniProtKB Chain 1708 2168 . . . ID=PRO_0000426595;Note=RNA-directed RNA polymerase O41174 UniProtKB Topological domain 2 1479 . . . Note=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255 O41174 UniProtKB Intramembrane 1480 1495 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255 O41174 UniProtKB Topological domain 1496 2168 . . . Note=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255 O41174 UniProtKB Domain 1189 1347 . . . Note=SF3 helicase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00551 O41174 UniProtKB Domain 1525 1703 . . . Note=Peptidase C3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 O41174 UniProtKB Domain 1934 2048 . . . Note=RdRp catalytic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00539 O41174 UniProtKB Zinc finger 1354 1370 . . . Note=C4-type%3B degenerate;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 O41174 UniProtKB Region 1 20 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite O41174 UniProtKB Region 551 567 . . . Note=Amphipathic alpha-helix;Ontology_term=ECO:0000255;evidence=ECO:0000255 O41174 UniProtKB Region 554 575 . . . Note=Amphipathic alpha-helix;Ontology_term=ECO:0000255;evidence=ECO:0000255 O41174 UniProtKB Region 576 607 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite O41174 UniProtKB Region 1085 1223 . . . Note=Oligomerization;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Region 1085 1157 . . . Note=Membrane-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Region 1106 1110 . . . Note=RNA-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Region 1397 1404 . . . Note=RNA-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Region 1408 1413 . . . Note=Oligomerization;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Active site 856 856 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Active site 874 874 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Active site 945 945 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Active site 1564 1564 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 O41174 UniProtKB Active site 1595 1595 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 O41174 UniProtKB Active site 1671 1671 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 O41174 UniProtKB Binding site 891 891 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 O41174 UniProtKB Binding site 893 893 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 O41174 UniProtKB Binding site 951 951 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 O41174 UniProtKB Binding site 953 953 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 O41174 UniProtKB Binding site 1354 1354 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 O41174 UniProtKB Binding site 1365 1365 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 O41174 UniProtKB Binding site 1370 1370 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 O41174 UniProtKB Binding site 1940 1940 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Binding site 1940 1940 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Binding site 2035 2035 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Binding site 2035 2035 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Site 69 70 . . . Note=Cleavage%3B by autolysis;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Site 315 316 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 O41174 UniProtKB Site 835 836 . . . Note=Cleavage%3B by autolysis;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 O41174 UniProtKB Site 985 986 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 O41174 UniProtKB Site 1084 1085 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 O41174 UniProtKB Site 1109 1109 . . . Note=Involved in the interaction with host RTN3;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q66478 O41174 UniProtKB Site 1413 1414 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 O41174 UniProtKB Site 1502 1503 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 O41174 UniProtKB Site 1524 1525 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 O41174 UniProtKB Site 1707 1708 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 O41174 UniProtKB Modified residue 1505 1505 . . . Note=O-(5'-phospho-RNA)-tyrosine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Lipidation 2 2 . . . Note=N-myristoyl glycine%3B by host;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 O41174 UniProtKB Helix 1432 1442 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6Q69 O41174 UniProtKB Helix 1445 1453 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6Q69 O41174 UniProtKB Helix 1462 1464 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6Q69 O41174 UniProtKB Beta strand 1466 1470 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6Q69