UniProtKB - O41026 (O41026_PBCV1)
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Protein
Submitted name:
ATP-dependent DNA ligase
Gene
A544R
Organism
Paramecium bursaria Chlorella virus 1 (PBCV-1)
Status
Functioni
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Binding sitei | 32 | AMPCombined sources | 1 | |
Binding sitei | 67 | AMPCombined sources | 1 | |
Binding sitei | 98 | AMPCombined sources | 1 |
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Nucleotide bindingi | 25 – 28 | AMPCombined sources | 4 | |
Nucleotide bindingi | 186 – 188 | AMPCombined sources | 3 |
GO - Molecular functioni
- ATP binding Source: InterPro
- DNA ligase (ATP) activity Source: InterPro
GO - Biological processi
- DNA ligation involved in DNA repair Source: InterPro
- DNA recombination Source: InterPro
Keywordsi
Molecular function | LigaseImported |
Ligand | Nucleotide-bindingCombined sources |
Enzyme and pathway databases
BRENDAi | 6.5.1.1. 8088. |
Names & Taxonomyi
Protein namesi | Submitted name: ATP-dependent DNA ligaseImported |
Gene namesi | Name:A544RImported |
Organismi | Paramecium bursaria Chlorella virus 1 (PBCV-1)Imported |
Taxonomic identifieri | 10506 [NCBI] |
Taxonomic lineagei | Viruses › dsDNA viruses, no RNA stage › Phycodnaviridae › Chlorovirus |
Virus hosti | Chlorella [TaxID: 114055] |
Proteomesi |
|
Structurei
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1P8L | X-ray | 2.95 | A | 1-298 | [»] | |
2Q2T | X-ray | 2.30 | A | 1-298 | [»] | |
2Q2U | X-ray | 3.00 | A/B/C/D | 1-298 | [»] | |
ProteinModelPortali | O41026. | |||||
SMRi | O41026. | |||||
ModBasei | Search... | |||||
MobiDBi | Search... |
Miscellaneous databases
EvolutionaryTracei | O41026. |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 7 – 177 | DNA_LIGASE_A3InterPro annotationAdd BLAST | 171 | |
Domaini | 230 – 293 | DNA_ligase_OB_2InterPro annotationAdd BLAST | 64 |
Phylogenomic databases
KOi | K10747. |
OrthoDBi | VOG090001TM. |
Family and domain databases
InterProi | View protein in InterPro IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR029319. DNA_ligase_OB. IPR012340. NA-bd_OB-fold. |
Pfami | View protein in Pfam PF01068. DNA_ligase_A_M. 1 hit. PF14743. DNA_ligase_OB_2. 1 hit. |
SUPFAMi | SSF50249. SSF50249. 1 hit. |
PROSITEi | View protein in PROSITE PS00333. DNA_LIGASE_A2. 1 hit. |
i Sequence
Sequence statusi: Complete.
O41026-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAITKPLLAA TLENIEDVQF PCLATPKIDG IRSVKQTQML SRTFKPIRNS
60 70 80 90 100
VMNRLLTELL PEGSDGEISI EGATFQDTTS AVMTGHKMYN AKFSYYWFDY
110 120 130 140 150
VTDDPLKKYI DRVEDMKNYI TVHPHILEHA QVKIIPLIPV EINNITELLQ
160 170 180 190 200
YERDVLSKGF EGVMIRKPDG KYKFGRSTLK EGILLKMKQF KDAEATIISM
210 220 230 240 250
TALFKNTNTK TKDNFGYSKR STHKSGKVEE DVMGSIEVDY DGVVFSIGTG
260 270 280 290
FDADQRRDFW QNKESYIGKM VKFKYFEMGS KDCPRFPVFI GIRHEEDR
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | JF411744 Genomic DNA. Translation: AAC96909.1. |
PIRi | T18046. |
RefSeqi | NP_048900.1. NC_000852.5. |
Genome annotation databases
GeneIDi | 917798. |
KEGGi | vg:917798. |
Similar proteinsi
Entry informationi
Entry namei | O41026_PBCV1 | |
Accessioni | O41026Primary (citable) accession number: O41026 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | January 1, 1998 |
Last sequence update: | January 1, 1998 | |
Last modified: | February 28, 2018 | |
This is version 107 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |