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O40925 (O40925_HHV8) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1376 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Binary interactions

With

Entry

#Exp.

IntAct

Notes

O409422EBI-2608602,EBI-2608626

Sequences

Sequence LengthMass (Da)Tools
O40925 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: F10B59E380745A49

FASTA1,376153,464
        10         20         30         40         50         60 
MEATLEQRPF PYLATEANLL TQIKESAADG LFKSFQLLLG KDAREGSVRF EALLGVYTNV 

        70         80         90        100        110        120 
VEFVKFLETA LAAACVNTEF KDLRRMIDGK IQFKISMPTI AHGDGRRPNK QRQYIVMKAC 

       130        140        150        160        170        180 
NKHHIGAEIE LAAADIELLF AEKETPLDFT EYAGAIKTIT SALQFGMDAL ERGLVDTVLA 

       190        200        210        220        230        240 
VKLRHAPPVF ILKTLGDPVY SERGLKKAVK SDMVSMFKAH LIEHSFFLDK AELMTRGKQY 

       250        260        270        280        290        300 
VLTMLSDMLA AVCEDTVFKG VSTYTTASGQ QVAGVLETTD SVMRRLMNLL GQVESAMSGP 

       310        320        330        340        350        360 
AAYASYVVRG ANLVTAVSYG RAMRNFEQFM ARIVDHPNAL PSVEGDKAAL ADGHDEIQRT 

       370        380        390        400        410        420 
RIAASLVKIG DKFVAIESLQ RMYNETQFPC PLNRRIQYTY FFPVGLHLPV PRYSTSVSVR 

       430        440        450        460        470        480 
GVESPAIQST ETWVVNKNNV PLCFGYQNAL KSICHPRMHN PTQSAQALNQ AFPDPDGGHG 

       490        500        510        520        530        540 
YGLRYEQTPN MNLFRTFHQY YMGKNVAFVP DVAQKALVTT EDLLHPTSHR LLRLEVHPFF 

       550        560        570        580        590        600 
DFFVHPCPGA RGSYRATHRT MVGNIPQPLA PREFQESRGA QFDDVTNMTH VIDQLTIDVI 

       610        620        630        640        650        660 
QETAFDPAYP LFCYVIEAMI HGQEEKFVMN MPLIALVIQT YWVNSGKLAF VNSYHMVRFI 

       670        680        690        700        710        720 
CTHMGNGSIP KEAHGHYRKI LGELIALEQA LLKLAGHETV GRTPITHLVS ALLDPHLLPP 

       730        740        750        760        770        780 
FAYHDVFTDL MQKSSRQPII KIGDQNYDNP QNRATFINLR GRMEDLVNNL VNIYQTRVNE 

       790        800        810        820        830        840 
DHDERHVLDV APLDENDYNP VLEKLFYYVL MPVCSNGHMC GMGVDYQNVA LTLTYNGPVF 

       850        860        870        880        890        900 
ADVVNAQDDI LLHLENGTLK DILQAGDIRP TVDMIRVLCT SFLTCPFVTQ AARVITKRDP 

       910        920        930        940        950        960 
AQSFATHEYG KDVAQTVLVN GFGAFAVADR SREAAETMFY PVPFNKLYAD PLVAATLHPL 

       970        980        990       1000       1010       1020 
LANYVTRLPN QRNAVVFNVP SNLMAEYEEW HKSPVAAYAA SCQATPGAIS AMVSMHQKLS 

      1030       1040       1050       1060       1070       1080 
APSFICQAKH RMHPGFAMTV VRTDEVLAEH ILYCSRASTS MFVGLPSVVR REVRSDAVTF 

      1090       1100       1110       1120       1130       1140 
EITHEIASLH TALGYSSVIA PAHVAAITTD MGVHCQDLFM IFPGDAYQDR QLHDYIKMKA 

      1150       1160       1170       1180       1190       1200 
GVQTGSPGNR MDHVGYTAGV PRCENLPGLS HGQLATCEII PTPVTSDVAY FQTPSNPRGR 

      1210       1220       1230       1240       1250       1260 
AACVVSCDAY SNESAERLLY DHSIPDPAYE CRSTNNPWAS QRGSLGDVLY NITFRQTALP 

      1270       1280       1290       1300       1310       1320 
GMYSPCRQFF HKEDIMRYNR GLYTLVNEYS ARLAGAPATS TTDLQYVVVN GTDVFLDQPC 

      1330       1340       1350       1360       1370 
HMLQEAYPTL AASHRVMLDE YMSNKQTHAP VHMGQYLIEE VAPMKRLLKL GNKVVY 

« Hide

References

[1]"Cell-homologous genes in the Kaposi's sarcoma-associated rhadinovirus human herpesvirus 8: determinants of its pathogenicity?"
Neipel F., Albrecht J.C., Fleckenstein B.
J. Virol. 71:4187-4192(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The genome of human herpesvirus 8 cloned from Kaposi's sarcoma."
Neipel F., Albrecht J.-C., Ensser A., Huang Y.-Q., Li J.J., Friedman-Kien A.E., Fleckenstein B.
Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U93872 Genomic DNA. Translation: AAB62606.1.

3D structure databases

ProteinModelPortalO40925.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActO40925. 2 interactions.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR000912. Herpes_MCP.
IPR023233. Herpes_MCP_upper.
[Graphical view]
PfamPF03122. Herpes_MCP. 1 hit.
[Graphical view]
PRINTSPR00235. HSVCAPSIDMCP.
SUPFAMSSF103417. SSF103417. 1 hit.
ProtoNetSearch...

Entry information

Entry nameO40925_HHV8
AccessionPrimary (citable) accession number: O40925
Entry history
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: June 11, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)