O40925 (O40925_HHV8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: ORf 25 EMBL AAB62606.1
Organism	Human herpesvirus 8 (HHV-8) (Kaposi's sarcoma-associated herpesvirus) EMBL AAB62606.1
Taxonomic identifier	37296 [NCBI]
Taxonomic lineage	Viruses › dsDNA viruses, no RNA stage › Herpesvirales › Herpesviridae › Gammaherpesvirinae › Rhadinovirus
Virus host	Homo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length	1376 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Gene Ontology (GO)
Cellular_component	viral capsid Inferred from electronic annotation. Source: InterPro
Molecular_function	structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	O40942	2	EBI-2608602,EBI-2608626

Sequences

	Sequence		Length	Mass (Da)
	O40925 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: F10B59E380745A49	FASTA	1,376	153,464
	10 20 30 40 50 60 MEATLEQRPF PYLATEANLL TQIKESAADG LFKSFQLLLG KDAREGSVRF EALLGVYTNV 70 80 90 100 110 120 VEFVKFLETA LAAACVNTEF KDLRRMIDGK IQFKISMPTI AHGDGRRPNK QRQYIVMKAC 130 140 150 160 170 180 NKHHIGAEIE LAAADIELLF AEKETPLDFT EYAGAIKTIT SALQFGMDAL ERGLVDTVLA 190 200 210 220 230 240 VKLRHAPPVF ILKTLGDPVY SERGLKKAVK SDMVSMFKAH LIEHSFFLDK AELMTRGKQY 250 260 270 280 290 300 VLTMLSDMLA AVCEDTVFKG VSTYTTASGQ QVAGVLETTD SVMRRLMNLL GQVESAMSGP 310 320 330 340 350 360 AAYASYVVRG ANLVTAVSYG RAMRNFEQFM ARIVDHPNAL PSVEGDKAAL ADGHDEIQRT 370 380 390 400 410 420 RIAASLVKIG DKFVAIESLQ RMYNETQFPC PLNRRIQYTY FFPVGLHLPV PRYSTSVSVR 430 440 450 460 470 480 GVESPAIQST ETWVVNKNNV PLCFGYQNAL KSICHPRMHN PTQSAQALNQ AFPDPDGGHG 490 500 510 520 530 540 YGLRYEQTPN MNLFRTFHQY YMGKNVAFVP DVAQKALVTT EDLLHPTSHR LLRLEVHPFF 550 560 570 580 590 600 DFFVHPCPGA RGSYRATHRT MVGNIPQPLA PREFQESRGA QFDDVTNMTH VIDQLTIDVI 610 620 630 640 650 660 QETAFDPAYP LFCYVIEAMI HGQEEKFVMN MPLIALVIQT YWVNSGKLAF VNSYHMVRFI 670 680 690 700 710 720 CTHMGNGSIP KEAHGHYRKI LGELIALEQA LLKLAGHETV GRTPITHLVS ALLDPHLLPP 730 740 750 760 770 780 FAYHDVFTDL MQKSSRQPII KIGDQNYDNP QNRATFINLR GRMEDLVNNL VNIYQTRVNE 790 800 810 820 830 840 DHDERHVLDV APLDENDYNP VLEKLFYYVL MPVCSNGHMC GMGVDYQNVA LTLTYNGPVF 850 860 870 880 890 900 ADVVNAQDDI LLHLENGTLK DILQAGDIRP TVDMIRVLCT SFLTCPFVTQ AARVITKRDP 910 920 930 940 950 960 AQSFATHEYG KDVAQTVLVN GFGAFAVADR SREAAETMFY PVPFNKLYAD PLVAATLHPL 970 980 990 1000 1010 1020 LANYVTRLPN QRNAVVFNVP SNLMAEYEEW HKSPVAAYAA SCQATPGAIS AMVSMHQKLS 1030 1040 1050 1060 1070 1080 APSFICQAKH RMHPGFAMTV VRTDEVLAEH ILYCSRASTS MFVGLPSVVR REVRSDAVTF 1090 1100 1110 1120 1130 1140 EITHEIASLH TALGYSSVIA PAHVAAITTD MGVHCQDLFM IFPGDAYQDR QLHDYIKMKA 1150 1160 1170 1180 1190 1200 GVQTGSPGNR MDHVGYTAGV PRCENLPGLS HGQLATCEII PTPVTSDVAY FQTPSNPRGR 1210 1220 1230 1240 1250 1260 AACVVSCDAY SNESAERLLY DHSIPDPAYE CRSTNNPWAS QRGSLGDVLY NITFRQTALP 1270 1280 1290 1300 1310 1320 GMYSPCRQFF HKEDIMRYNR GLYTLVNEYS ARLAGAPATS TTDLQYVVVN GTDVFLDQPC 1330 1340 1350 1360 1370 HMLQEAYPTL AASHRVMLDE YMSNKQTHAP VHMGQYLIEE VAPMKRLLKL GNKVVY

References

[1]	"Cell-homologous genes in the Kaposi's sarcoma-associated rhadinovirus human herpesvirus 8: determinants of its pathogenicity?" Neipel F., Albrecht J.-C., Fleckenstein B. J. Virol. 71:4187-4192(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"The genome of human herpesvirus 8 cloned from Kaposi's sarcoma." Neipel F., Albrecht J.-C., Ensser A., Huang Y.-Q., Li J.J., Friedman-Kien A.E., Fleckenstein B. Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U93872 Genomic DNA. Translation: AAB62606.1.
3D structure databases
ProteinModelPortal	O40925.
ModBase	Search...
Protein-protein interaction databases
IntAct	O40925. 2 interactions.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR000912. Herpes_MCP. IPR023233. Herpes_MCP_upper. [Graphical view]
Pfam	PF03122. Herpes_MCP. 1 hit. [Graphical view]
PRINTS	PR00235. HSVCAPSIDMCP.
SUPFAM	SSF103417. Herpes_MCP_upper. 1 hit.
ProtoNet	Search...

Entry information

Entry name

O40925_HHV8

Accession

Primary (citable) accession number: O40925

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	April 3, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)