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Protein
Submitted name:

Non-structural protein 4a/b

Gene

NS4a/b

Organism
Hepatitis C virus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Non-structural protein 4a/bImported
Gene namesi
Name:NS4a/bImported
OrganismiHepatitis C virusImported
Taxonomic identifieri11103 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA positive-strand viruses, no DNA stageFlaviviridaeHepacivirus

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1A1RX-ray2.50C/D6-24[»]
1N1LX-ray2.60C/D6-24[»]
1RGQX-ray2.90C/D6-24[»]
1RTLX-ray2.75C/D6-24[»]
2A4QX-ray2.45B/D6-24[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO39914.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 3939HCV_NS4aInterPro annotationAdd
BLAST

Family and domain databases

InterProiIPR000745. HCV_NS4a.
[Graphical view]
PfamiPF01006. HCV_NS4a. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

O39914-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
YCLTTGSVVI VGRIILSGKP AIIPDREVLY QAFDEMEECA SHLPYIEHGM
60 70 80
QLAEQFKQKA LGLLQTATKQ AEAAAPVVES KWRALETF
Length:88
Mass (Da):9,750
Last modified:June 1, 2002 - v2
Checksum:iBF7B5198B317B6E0
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei88 – 881Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF007519 Genomic RNA. Translation: AAB62970.2.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF007519 Genomic RNA. Translation: AAB62970.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1A1RX-ray2.50C/D6-24[»]
1N1LX-ray2.60C/D6-24[»]
1RGQX-ray2.90C/D6-24[»]
1RTLX-ray2.75C/D6-24[»]
2A4QX-ray2.45B/D6-24[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

euHCVdbiAF007519.

Miscellaneous databases

EvolutionaryTraceiO39914.

Family and domain databases

InterProiIPR000745. HCV_NS4a.
[Graphical view]
PfamiPF01006. HCV_NS4a. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO39914_9HEPC
AccessioniPrimary (citable) accession number: O39914
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: June 1, 2002
Last modified: December 9, 2015
This is version 53 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.