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O39164

- MCP_IRV16

UniProt

O39164 - MCP_IRV16

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Protein

Major capsid protein

Gene

MCP

Organism
Costelytra zealandica iridescent virus (CzIV) (Insect iridescent virus type 16)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Major capsid protein that self assembles to form an icosahedral capsid. Represents around 50% of the total virion protein mass (By similarity).By similarity

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Major capsid protein
Short name:
MCP
Alternative name(s):
P50
Gene namesi
Name:MCP
OrganismiCostelytra zealandica iridescent virus (CzIV) (Insect iridescent virus type 16)
Taxonomic identifieri68348 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
Virus hostiCostelytra zealandica [TaxID: 50579]

Subcellular locationi

Virion Curated

GO - Cellular componenti

  1. viral capsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 462462Major capsid proteinPRO_0000222383Add
BLAST

Expressioni

Keywords - Developmental stagei

Late protein

Interactioni

Subunit structurei

Homotrimer.By similarity

Structurei

3D structure databases

ProteinModelPortaliO39164.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the NCLDV major capsid protein family.Curated

Family and domain databases

Gene3Di2.70.9.10. 1 hit.
2.70.9.20. 1 hit.
InterProiIPR016114. ASFV_p72.
IPR016111. Hexon_subdom4.
IPR007542. Virus_major_coat_C.
IPR016112. VP_dsDNA_II.
[Graphical view]
PfamiPF04451. Capsid_NCLDV. 1 hit.
[Graphical view]
SUPFAMiSSF49749. SSF49749. 2 hits.

Sequencei

Sequence statusi: Complete.

O39164-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSMSSSNITS GFIDIATFDE IEKYMYGGPT ATAYFVREIR KSTWFTQVPV
60 70 80 90 100
PLSRNTGNAA FGQEWSVSIS RAGDYLLQTW LRVNIPQVTL NAQLGPTFGL
110 120 130 140 150
RWTRNFMHNL IREATITFND LVAARFDNYH LDFWSAFTVP ASKKIGYDNM
160 170 180 190 200
IGNISALTNP VAPGGSLGSV GGINLNLPLP FFFSRDTGVA LPTAALPYNE
210 220 230 240 250
MQINFNFRDW PELLILTNTA LVPPASPYVP IVVGTHLSAA PVLGAVQVWA
260 270 280 290 300
NYAIVSNEER RRMGCAIRDI LIEQVQTAPR QNYTPLTNAM PTFDIRFSHA
310 320 330 340 350
IKALFFSVRN KTSSAEWSNY ATSSPVVTGQ LVNYEPPGAF DPISNTTLIY
360 370 380 390 400
ENTNRLGAMG SDYFSLINPF YHAPTIPSSI GYHLYSYSLH FFDLDPMGST
410 420 430 440 450
NYGKLTNVSV VPQASPAAVT AAGGSGAAGS GADYAQSYEF VIIGVNNNII
460
RISGGALGFP VL
Length:462
Mass (Da):50,419
Last modified:January 1, 1998 - v1
Checksum:iF28E4D3C1B8F68EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF025775 Genomic DNA. Translation: AAB82569.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF025775 Genomic DNA. Translation: AAB82569.1 .

3D structure databases

ProteinModelPortali O39164.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 2.70.9.10. 1 hit.
2.70.9.20. 1 hit.
InterProi IPR016114. ASFV_p72.
IPR016111. Hexon_subdom4.
IPR007542. Virus_major_coat_C.
IPR016112. VP_dsDNA_II.
[Graphical view ]
Pfami PF04451. Capsid_NCLDV. 1 hit.
[Graphical view ]
SUPFAMi SSF49749. SSF49749. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Comparison of the major capsid protein genes, terminal redundancies, and DNA-DNA homologies of two New Zealand iridoviruses."
    Webby R.J., Kalmakoff J.
    Virus Res. 59:179-189(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiMCP_IRV16
AccessioniPrimary (citable) accession number: O39164
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: January 1, 1998
Last modified: October 1, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3