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O39164

- MCP_IRV16

UniProt

O39164 - MCP_IRV16

Protein

Major capsid protein

Gene

MCP

Organism
Costelytra zealandica iridescent virus (CzIV) (Insect iridescent virus type 16)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (01 Jan 1998)
      Previous versions | rss
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    Functioni

    Major capsid protein that self assembles to form an icosahedral capsid. Represents around 50% of the total virion protein mass By similarity.By similarity

    GO - Molecular functioni

    1. structural molecule activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Major capsid protein
    Short name:
    MCP
    Alternative name(s):
    P50
    Gene namesi
    Name:MCP
    OrganismiCostelytra zealandica iridescent virus (CzIV) (Insect iridescent virus type 16)
    Taxonomic identifieri68348 [NCBI]
    Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
    Virus hostiCostelytra zealandica [TaxID: 50579]

    Subcellular locationi

    Virion Curated

    GO - Cellular componenti

    1. viral capsid Source: UniProtKB-KW

    Keywords - Cellular componenti

    Capsid protein, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 462462Major capsid proteinPRO_0000222383Add
    BLAST

    Expressioni

    Keywords - Developmental stagei

    Late protein

    Interactioni

    Subunit structurei

    Homotrimer.By similarity

    Structurei

    3D structure databases

    ProteinModelPortaliO39164.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the NCLDV major capsid protein family.Curated

    Family and domain databases

    Gene3Di2.70.9.10. 1 hit.
    2.70.9.20. 1 hit.
    InterProiIPR016114. ASFV_p72.
    IPR016111. Hexon_subdom4.
    IPR007542. Virus_major_coat_C.
    IPR016112. VP_dsDNA_II.
    [Graphical view]
    PfamiPF04451. Capsid_NCLDV. 1 hit.
    [Graphical view]
    SUPFAMiSSF49749. SSF49749. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    O39164-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSMSSSNITS GFIDIATFDE IEKYMYGGPT ATAYFVREIR KSTWFTQVPV    50
    PLSRNTGNAA FGQEWSVSIS RAGDYLLQTW LRVNIPQVTL NAQLGPTFGL 100
    RWTRNFMHNL IREATITFND LVAARFDNYH LDFWSAFTVP ASKKIGYDNM 150
    IGNISALTNP VAPGGSLGSV GGINLNLPLP FFFSRDTGVA LPTAALPYNE 200
    MQINFNFRDW PELLILTNTA LVPPASPYVP IVVGTHLSAA PVLGAVQVWA 250
    NYAIVSNEER RRMGCAIRDI LIEQVQTAPR QNYTPLTNAM PTFDIRFSHA 300
    IKALFFSVRN KTSSAEWSNY ATSSPVVTGQ LVNYEPPGAF DPISNTTLIY 350
    ENTNRLGAMG SDYFSLINPF YHAPTIPSSI GYHLYSYSLH FFDLDPMGST 400
    NYGKLTNVSV VPQASPAAVT AAGGSGAAGS GADYAQSYEF VIIGVNNNII 450
    RISGGALGFP VL 462
    Length:462
    Mass (Da):50,419
    Last modified:January 1, 1998 - v1
    Checksum:iF28E4D3C1B8F68EE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF025775 Genomic DNA. Translation: AAB82569.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF025775 Genomic DNA. Translation: AAB82569.1 .

    3D structure databases

    ProteinModelPortali O39164.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 2.70.9.10. 1 hit.
    2.70.9.20. 1 hit.
    InterProi IPR016114. ASFV_p72.
    IPR016111. Hexon_subdom4.
    IPR007542. Virus_major_coat_C.
    IPR016112. VP_dsDNA_II.
    [Graphical view ]
    Pfami PF04451. Capsid_NCLDV. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49749. SSF49749. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Comparison of the major capsid protein genes, terminal redundancies, and DNA-DNA homologies of two New Zealand iridoviruses."
      Webby R.J., Kalmakoff J.
      Virus Res. 59:179-189(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

    Entry informationi

    Entry nameiMCP_IRV16
    AccessioniPrimary (citable) accession number: O39164
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 23, 2002
    Last sequence update: January 1, 1998
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3