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O39164

- MCP_IRV16

UniProt

O39164 - MCP_IRV16

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Protein
Major capsid protein
Gene
MCP
Organism
Costelytra zealandica iridescent virus (CzIV) (Insect iridescent virus type 16)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Major capsid protein that self assembles to form an icosahedral capsid. Represents around 50% of the total virion protein mass By similarity.

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Major capsid protein
Short name:
MCP
Alternative name(s):
P50
Gene namesi
Name:MCP
OrganismiCostelytra zealandica iridescent virus (CzIV) (Insect iridescent virus type 16)
Taxonomic identifieri68348 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
Virus hostiCostelytra zealandica [TaxID: 50579]

Subcellular locationi

Virion Reviewed prediction

GO - Cellular componenti

  1. viral capsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 462462Major capsid protein
PRO_0000222383Add
BLAST

Expressioni

Keywords - Developmental stagei

Late protein

Interactioni

Subunit structurei

Homotrimer By similarity.

Structurei

3D structure databases

ProteinModelPortaliO39164.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

Gene3Di2.70.9.10. 1 hit.
2.70.9.20. 1 hit.
InterProiIPR016114. ASFV_p72.
IPR016111. Hexon_subdom4.
IPR007542. Virus_major_coat_C.
IPR016112. VP_dsDNA_II.
[Graphical view]
PfamiPF04451. Capsid_NCLDV. 1 hit.
[Graphical view]
SUPFAMiSSF49749. SSF49749. 2 hits.

Sequencei

Sequence statusi: Complete.

O39164-1 [UniParc]FASTAAdd to Basket

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MSMSSSNITS GFIDIATFDE IEKYMYGGPT ATAYFVREIR KSTWFTQVPV    50
PLSRNTGNAA FGQEWSVSIS RAGDYLLQTW LRVNIPQVTL NAQLGPTFGL 100
RWTRNFMHNL IREATITFND LVAARFDNYH LDFWSAFTVP ASKKIGYDNM 150
IGNISALTNP VAPGGSLGSV GGINLNLPLP FFFSRDTGVA LPTAALPYNE 200
MQINFNFRDW PELLILTNTA LVPPASPYVP IVVGTHLSAA PVLGAVQVWA 250
NYAIVSNEER RRMGCAIRDI LIEQVQTAPR QNYTPLTNAM PTFDIRFSHA 300
IKALFFSVRN KTSSAEWSNY ATSSPVVTGQ LVNYEPPGAF DPISNTTLIY 350
ENTNRLGAMG SDYFSLINPF YHAPTIPSSI GYHLYSYSLH FFDLDPMGST 400
NYGKLTNVSV VPQASPAAVT AAGGSGAAGS GADYAQSYEF VIIGVNNNII 450
RISGGALGFP VL 462
Length:462
Mass (Da):50,419
Last modified:January 1, 1998 - v1
Checksum:iF28E4D3C1B8F68EE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF025775 Genomic DNA. Translation: AAB82569.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF025775 Genomic DNA. Translation: AAB82569.1 .

3D structure databases

ProteinModelPortali O39164.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 2.70.9.10. 1 hit.
2.70.9.20. 1 hit.
InterProi IPR016114. ASFV_p72.
IPR016111. Hexon_subdom4.
IPR007542. Virus_major_coat_C.
IPR016112. VP_dsDNA_II.
[Graphical view ]
Pfami PF04451. Capsid_NCLDV. 1 hit.
[Graphical view ]
SUPFAMi SSF49749. SSF49749. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Comparison of the major capsid protein genes, terminal redundancies, and DNA-DNA homologies of two New Zealand iridoviruses."
    Webby R.J., Kalmakoff J.
    Virus Res. 59:179-189(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiMCP_IRV16
AccessioniPrimary (citable) accession number: O39164
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: January 1, 1998
Last modified: October 16, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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