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O39164 (MCP_IRV16) Reviewed, UniProtKB/Swiss-Prot

Last modified October 16, 2013. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Major capsid protein

Short name=MCP
Alternative name(s):
P50
Gene names
Name:MCP
OrganismCostelytra zealandica iridescent virus (CzIV) (Insect iridescent virus type 16)
Taxonomic identifier68348 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
Virus hostCostelytra zealandica [TaxID: 50579]

Protein attributes

Sequence length462 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Major capsid protein that self assembles to form an icosahedral capsid. Represents around 50% of the total virion protein mass By similarity.

Subunit structure

Homotrimer By similarity.

Subcellular location

Virion Potential.

Sequence similarities

Belongs to the NCLDV major capsid protein family.

Ontologies

Keywords
   Cellular componentCapsid protein
Virion
   Developmental stageLate protein
Gene Ontology (GO)
   Cellular_componentviral capsid

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural molecule activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 462462Major capsid protein
PRO_0000222383

Sequences

Sequence LengthMass (Da)Tools
O39164 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: F28E4D3C1B8F68EE

FASTA46250,419
        10         20         30         40         50         60 
MSMSSSNITS GFIDIATFDE IEKYMYGGPT ATAYFVREIR KSTWFTQVPV PLSRNTGNAA 

        70         80         90        100        110        120 
FGQEWSVSIS RAGDYLLQTW LRVNIPQVTL NAQLGPTFGL RWTRNFMHNL IREATITFND 

       130        140        150        160        170        180 
LVAARFDNYH LDFWSAFTVP ASKKIGYDNM IGNISALTNP VAPGGSLGSV GGINLNLPLP 

       190        200        210        220        230        240 
FFFSRDTGVA LPTAALPYNE MQINFNFRDW PELLILTNTA LVPPASPYVP IVVGTHLSAA 

       250        260        270        280        290        300 
PVLGAVQVWA NYAIVSNEER RRMGCAIRDI LIEQVQTAPR QNYTPLTNAM PTFDIRFSHA 

       310        320        330        340        350        360 
IKALFFSVRN KTSSAEWSNY ATSSPVVTGQ LVNYEPPGAF DPISNTTLIY ENTNRLGAMG 

       370        380        390        400        410        420 
SDYFSLINPF YHAPTIPSSI GYHLYSYSLH FFDLDPMGST NYGKLTNVSV VPQASPAAVT 

       430        440        450        460 
AAGGSGAAGS GADYAQSYEF VIIGVNNNII RISGGALGFP VL 

« Hide

References

[1]"Comparison of the major capsid protein genes, terminal redundancies, and DNA-DNA homologies of two New Zealand iridoviruses."
Webby R.J., Kalmakoff J.
Virus Res. 59:179-189(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF025775 Genomic DNA. Translation: AAB82569.1.

3D structure databases

ProteinModelPortalO39164.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.70.9.10. 1 hit.
2.70.9.20. 1 hit.
InterProIPR016114. ASFV_p72.
IPR016111. Hexon_subdom4.
IPR007542. Virus_major_coat_C.
IPR016112. VP_dsDNA_II.
[Graphical view]
PfamPF04451. Capsid_NCLDV. 1 hit.
[Graphical view]
SUPFAMSSF49749. SSF49749. 2 hits.
ProtoNetSearch...

Entry information

Entry nameMCP_IRV16
AccessionPrimary (citable) accession number: O39164
Entry history
Integrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: January 1, 1998
Last modified: October 16, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families