O39164 (MCP_IRV16) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Major capsid protein
Short name=MCP

Alternative name(s):
P50

Gene names

Name:

MCP

Organism

Costelytra zealandica iridescent virus (CzIV) (Insect iridescent virus type 16)

Taxonomic identifier

68348 [NCBI]

Taxonomic lineage

Viruses › dsDNA viruses, no RNA stage › Iridoviridae › Iridovirus › unclassified Iridovirus › Invertebrate iridescent virus 16

Virus host

Costelytra zealandica [TaxID: 50579]

Protein attributes

Sequence length	462 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Major capsid protein that self assembles to form an icosahedral capsid. Represents around 50% of the total virion protein mass By similarity.
Subunit structure	Homotrimer By similarity.
Subcellular location	Virion Potential.
Sequence similarities	Belongs to the NCLDV major capsid protein family.

Ontologies

Keywords
Cellular component	Virion
Developmental stage	Late protein
Molecular function	Capsid protein
Gene Ontology (GO)
Cellular_component	viral capsid Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 462	462	Major capsid protein		PRO_0000222383

Sequences

	Sequence		Length	Mass (Da)
	O39164 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: F28E4D3C1B8F68EE	FASTA	462	50,419
	10 20 30 40 50 60 MSMSSSNITS GFIDIATFDE IEKYMYGGPT ATAYFVREIR KSTWFTQVPV PLSRNTGNAA 70 80 90 100 110 120 FGQEWSVSIS RAGDYLLQTW LRVNIPQVTL NAQLGPTFGL RWTRNFMHNL IREATITFND 130 140 150 160 170 180 LVAARFDNYH LDFWSAFTVP ASKKIGYDNM IGNISALTNP VAPGGSLGSV GGINLNLPLP 190 200 210 220 230 240 FFFSRDTGVA LPTAALPYNE MQINFNFRDW PELLILTNTA LVPPASPYVP IVVGTHLSAA 250 260 270 280 290 300 PVLGAVQVWA NYAIVSNEER RRMGCAIRDI LIEQVQTAPR QNYTPLTNAM PTFDIRFSHA 310 320 330 340 350 360 IKALFFSVRN KTSSAEWSNY ATSSPVVTGQ LVNYEPPGAF DPISNTTLIY ENTNRLGAMG 370 380 390 400 410 420 SDYFSLINPF YHAPTIPSSI GYHLYSYSLH FFDLDPMGST NYGKLTNVSV VPQASPAAVT 430 440 450 460 AAGGSGAAGS GADYAQSYEF VIIGVNNNII RISGGALGFP VL

References

[1]	"Comparison of the major capsid protein genes, terminal redundancies, and DNA-DNA homologies of two New Zealand iridoviruses." Webby R.J., Kalmakoff J. Virus Res. 59:179-189(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF025775 Genomic DNA. Translation: AAB82569.1.
3D structure databases
ProteinModelPortal	O39164.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
Gene3D	2.70.9.10. 1 hit. 2.70.9.20. 1 hit.
InterPro	IPR016114. ASFV_p72. IPR016111. Hexon_subdom4. IPR016112. Virus_hexon. IPR007542. Virus_major_coat_C. [Graphical view]
Pfam	PF04451. Capsid_NCLDV. 1 hit. [Graphical view]
SUPFAM	SSF49749. Coat_hexon/vp54/p3_dsDNA-vir. 2 hits.
ProtoNet	Search...

Entry information

Entry name

MCP_IRV16

Accession

Primary (citable) accession number: O39164

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 23, 2002
Last sequence update:	January 1, 1998
Last modified:	April 3, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Viral Protein Annotation Program