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O39163

- MCP_IRV9

UniProt

O39163 - MCP_IRV9

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Protein

Major capsid protein

Gene
MCP
Organism
Wiseana iridescent virus (WIV) (Insect iridescent virus type 9)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Major capsid protein that self assembles to form an icosahedral capsid. Represents around 50% of the total virion protein mass By similarity.

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Major capsid protein
Short name:
MCP
Alternative name(s):
P50
Gene namesi
Name:MCP
OrganismiWiseana iridescent virus (WIV) (Insect iridescent virus type 9)
Taxonomic identifieri68347 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
Virus hostiWiseana cervinata [TaxID: 107013]

Subcellular locationi

Virion Reviewed prediction

GO - Cellular componenti

  1. viral capsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 484484Major capsid proteinPRO_0000222382Add
BLAST

Expressioni

Keywords - Developmental stagei

Late protein

Interactioni

Subunit structurei

Homotrimer By similarity.

Structurei

3D structure databases

ProteinModelPortaliO39163.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

Gene3Di2.70.9.10. 1 hit.
2.70.9.20. 1 hit.
InterProiIPR016114. ASFV_p72.
IPR016111. Hexon_subdom4.
IPR007542. Virus_major_coat_C.
IPR016112. VP_dsDNA_II.
[Graphical view]
PfamiPF04451. Capsid_NCLDV. 1 hit.
[Graphical view]
SUPFAMiSSF49749. SSF49749. 2 hits.

Sequencei

Sequence statusi: Complete.

O39163-1 [UniParc]FASTAAdd to Basket

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MSMSSSNITS GFIDIATFDE IEKYMYGGPT ATAYFVREIR KSTWFTQVPV    50
PLSRNTGNAA FGQEWSVSIS RAGDYLLQTW LRVNIPQVTL NPLLAATFSL 100
RWTRNLMHNL IREATITFND LVAARFDNYH LDFWSAFTVP ASKRTGYDNM 150
IGNVSSLINP VAPGGNLGST GGTNLNLPLP FFFSRDTGVA LPTAALPYNE 200
MQINFNFRDW TELLVLQNSA LVAPASPYVP IVVPTHLTVA PVLGPVQVWA 250
NYAIVSNEER RRMGCAIRDI LIEQVQTAPR QNYTPLTNAS PTFDIRFSHA 300
IKALFFSVRN KTSASEWSNY ATSSPVVTGA TVNFEPTGSF DPIANTTLIY 350
ENTNRLGAMG SDYFSLINPF YHAPTIPSFI GYHLYSYSLH FYDLDPMGST 400
NYGKLTNVSV VPQASPAAVN AASGAGGFPG SDYPQSYEFV IVAVNNNIVR 450
ISGGETPQNY LSGSFVTLLN RRKWSREGPM IMVQ 484
Length:484
Mass (Da):53,390
Last modified:January 1, 1998 - v1
Checksum:i3A9FE039FAFAA68D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF025774 Genomic DNA. Translation: AAB82568.1.
RefSeqiYP_004732793.1. NC_015780.1.

Genome annotation databases

GeneIDi10963732.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF025774 Genomic DNA. Translation: AAB82568.1 .
RefSeqi YP_004732793.1. NC_015780.1.

3D structure databases

ProteinModelPortali O39163.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 10963732.

Family and domain databases

Gene3Di 2.70.9.10. 1 hit.
2.70.9.20. 1 hit.
InterProi IPR016114. ASFV_p72.
IPR016111. Hexon_subdom4.
IPR007542. Virus_major_coat_C.
IPR016112. VP_dsDNA_II.
[Graphical view ]
Pfami PF04451. Capsid_NCLDV. 1 hit.
[Graphical view ]
SUPFAMi SSF49749. SSF49749. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Comparison of the major capsid protein genes, terminal redundancies, and DNA-DNA homologies of two New Zealand iridoviruses."
    Webby R.J., Kalmakoff J.
    Virus Res. 59:179-189(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiMCP_IRV9
AccessioniPrimary (citable) accession number: O39163
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: January 1, 1998
Last modified: October 16, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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