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Protein

Replication-associated protein

Gene
N/A
Organism
Tomato mottle Taino virus
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Replication-associated proteinUniRule annotation (EC:3.1.21.-UniRule annotation)
Short name:
RepUniRule annotation
OrganismiTomato mottle Taino virusImported
Taxonomic identifieri223358 [NCBI]
Taxonomic lineageiVirusesssDNA virusesGeminiviridaeBegomovirus

Subcellular locationi

  • Host nucleus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Host nucleusUniRule annotation

Interactioni

Subunit structurei

Homooligomer.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliO36624.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 119113Gemini_AL1InterPro annotationAdd
BLAST
Domaini126 – 231106Gemini_AL1_MInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the geminiviridae Rep protein family.UniRule annotation

Family and domain databases

InterProiIPR001301. Gemini_AL1_CLV.
IPR001191. Gemini_AL1_REP.
IPR022690. Gemini_AL1_REP_cat-dom.
IPR022692. Gemini_AL1_REP_central.
[Graphical view]
PfamiPF00799. Gemini_AL1. 1 hit.
PF08283. Gemini_AL1_M. 1 hit.
[Graphical view]
PRINTSiPR00227. GEMCOATAL1.
PR00228. GEMCOATCLVL1.

Sequencei

Sequence statusi: Complete.

O36624-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRKGSFSVK AKNYFLTYPQ CSLSKEEALS QIQNLNTPVD KKFIKICREL
60 70 80 90 100
HENGEPHLHV LVQFEGKYNC TNNRFFDVVS PTRSAHFHPN IQGAKSSSDV
110 120 130 140 150
KTYITKDGDT LEWGEFQIDG RSARGGQQSA NDSYAKALNA GNVQSAMAVL
160 170 180 190 200
KEEQPKDFVL HNHNIRSNLE RIFAKAPEPW VPPFPLSSFT NVPDEMQEWA
210 220 230 240 250
DVYFGAGSAA RPNRPMSIVI EGDSRTGKTM WARALGPHNY LSGHLDFNTR
260 270 280 290 300
VYSNDVQYNV IDDIAPHYLK LKHWKELLGA QRDWQSNCKY GKPVQIKGGI
310 320 330 340 350
PAIVLCNPGE GASYKDFLSK DENTSLRDWT IKNAMFITLT TPLYQDSTQA
360
RQEEGNQETA C
Length:361
Mass (Da):40,723
Last modified:January 1, 1998 - v1
Checksum:i3D43D231F8CC7FB5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF012300 Genomic DNA. Translation: AAD09668.1.
RefSeqiNP_044925.1. NC_001828.1.

Genome annotation databases

GeneIDi1733923.
KEGGivg:1733923.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF012300 Genomic DNA. Translation: AAD09668.1.
RefSeqiNP_044925.1. NC_001828.1.

3D structure databases

ProteinModelPortaliO36624.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1733923.
KEGGivg:1733923.

Family and domain databases

InterProiIPR001301. Gemini_AL1_CLV.
IPR001191. Gemini_AL1_REP.
IPR022690. Gemini_AL1_REP_cat-dom.
IPR022692. Gemini_AL1_REP_central.
[Graphical view]
PfamiPF00799. Gemini_AL1. 1 hit.
PF08283. Gemini_AL1_M. 1 hit.
[Graphical view]
PRINTSiPR00227. GEMCOATAL1.
PR00228. GEMCOATCLVL1.
ProtoNetiSearch...

Entry informationi

Entry nameiO36624_9GEMI
AccessioniPrimary (citable) accession number: O36624
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: December 9, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.