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Protein
Submitted name:

Putative G-protein coupled receptor

Gene

Gpr20

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorUniRule annotation, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Submitted name:
Putative G-protein coupled receptorImported
Gene namesi
Name:Gpr20Imported
Synonyms:GPCR-5-1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi620034. Gpr20.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei52 – 7928HelicalSequence analysisAdd
BLAST
Transmembranei91 – 11626HelicalSequence analysisAdd
BLAST
Transmembranei128 – 15326HelicalSequence analysisAdd
BLAST
Transmembranei165 – 18622HelicalSequence analysisAdd
BLAST
Transmembranei198 – 22225HelicalSequence analysisAdd
BLAST
Transmembranei243 – 26018HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

GenevisibleiO35797. RN.

Structurei

3D structure databases

ProteinModelPortaliO35797.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini70 – 298229G_PROTEIN_RECEP_F1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOVERGENiHBG051800.
KOiK04317.
PhylomeDBiO35797.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O35797-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMPSALSSR PWDAVFPNTT TAAWTNGSVP ETPLFYLFAR LDEELHATFP
60 70 80 90 100
SLWLALMVVH GTIFLAGLFL NGLALYVFCC RTRAKTPSVT ISINLVVTDL
110 120 130 140 150
LVGLSLPTRF AVFYGARGCL HCAFPHVLGY FLNMHCSILF LTCICVDRYL
160 170 180 190 200
AIVQPEGSHR WRQPACAKAV CVFVWLAAGV VTLSVLGVKT GGRSCCRVFA
210 220 230 240 250
LTVLEFLLPL LVISVFTGRI MCALSRPGLV RQGRQRRMRA MQLLLTVLVI
260 270 280 290 300
FLVCFTPFHA RQVTVALWPN VPYHTSLVAY HVAVTLSSLN SCMDPIVYCF
310 320 330 340 350
ITSGFQATVQ GLFYQRGEEF KPSTMDMVSM HKSTKGSAPF TSSAPVLTPS

PSL
Length:353
Mass (Da):38,859
Last modified:January 1, 1998 - v1
Checksum:i5AEC947A6908CD8F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y14706 Genomic DNA. Translation: CAA75008.1.
RefSeqiNP_071552.1. NM_022216.1.
UniGeneiRn.138120.

Genome annotation databases

GeneIDi60667.
KEGGirno:60667.
UCSCiRGD:620034. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y14706 Genomic DNA. Translation: CAA75008.1.
RefSeqiNP_071552.1. NM_022216.1.
UniGeneiRn.138120.

3D structure databases

ProteinModelPortaliO35797.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

GPCRDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi60667.
KEGGirno:60667.
UCSCiRGD:620034. rat.

Organism-specific databases

CTDi2843.
RGDi620034. Gpr20.

Phylogenomic databases

HOVERGENiHBG051800.
KOiK04317.
PhylomeDBiO35797.

Miscellaneous databases

PROiO35797.

Gene expression databases

GenevisibleiO35797. RN.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO35797_RAT
AccessioniPrimary (citable) accession number: O35797
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: June 8, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.