ID NR1I3_MOUSE Reviewed; 358 AA. AC O35627; O35628; Q3V008; DT 15-JUL-1999, integrated into UniProtKB/Swiss-Prot. DT 27-JUL-2011, sequence version 2. DT 24-JAN-2024, entry version 196. DE RecName: Full=Nuclear receptor subfamily 1 group I member 3; DE AltName: Full=Constitutive androstane receptor; DE Short=CAR; DE AltName: Full=Orphan nuclear receptor MB67; GN Name=Nr1i3; Synonyms=Car; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. OX NCBI_TaxID=10090; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS CAR1 AND CAR2). RC TISSUE=Liver; RX PubMed=9295294; DOI=10.1074/jbc.272.38.23565; RA Choi H.-S., Chung M., Tzameli I., Simha D., Lee Y.-K., Seol W., Moore D.D.; RT "Differential transactivation by two isoforms of the orphan nuclear hormone RT receptor CAR."; RL J. Biol. Chem. 272:23565-23571(1997). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM CAR1). RC STRAIN=C57BL/6J; TISSUE=Ovary, and Uterus; RX PubMed=16141072; DOI=10.1126/science.1112014; RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J., RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.; RT "The transcriptional landscape of the mammalian genome."; RL Science 309:1559-1563(2005). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.; RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases. RN [4] RP FUNCTION. RX PubMed=10462436; DOI=10.1006/abbi.1999.1351; RA Waxman D.J.; RT "P450 gene induction by structurally diverse xenochemicals: central role of RT nuclear receptors CAR, PXR, and PPAR."; RL Arch. Biochem. Biophys. 369:11-23(1999). RN [5] RP INTERACTION WITH PSMC4. RX PubMed=8603043; DOI=10.1016/0960-0760(95)00220-0; RA Choi H.S., Seol W., Moore D.D.; RT "A component of the 26S proteasome binds on orphan member of the nuclear RT hormone receptor superfamily."; RL J. Steroid Biochem. Mol. Biol. 56:23-30(1996). RN [6] RP INTERACTION WITH DNAJC7 AND HSP90, AND SUBCELLULAR LOCATION. RX PubMed=14573755; DOI=10.1124/mol.64.5.1069; RA Kobayashi K., Sueyoshi T., Inoue K., Moore R., Negishi M.; RT "Cytoplasmic accumulation of the nuclear receptor CAR by a RT tetratricopeptide repeat protein in HepG2 cells."; RL Mol. Pharmacol. 64:1069-1075(2003). RN [7] RP INTERACTION WITH ECT2, AND SUBCELLULAR LOCATION. RX PubMed=17904126; DOI=10.1016/j.febslet.2007.09.024; RA Hosseinpour F., Timsit Y., Koike C., Matsui K., Yamamoto Y., Moore R., RA Negishi M.; RT "Overexpression of the Rho-guanine nucleotide exchange factor ECT2 inhibits RT nuclear translocation of nuclear receptor CAR in the mouse liver."; RL FEBS Lett. 581:4937-4942(2007). RN [8] RP INTERACTION WITH CRY1 AND CRY2. RX PubMed=28751364; DOI=10.1073/pnas.1704955114; RA Kriebs A., Jordan S.D., Soto E., Henriksson E., Sandate C.R., Vaughan M.E., RA Chan A.B., Duglan D., Papp S.J., Huber A.L., Afetian M.E., Yu R.T., RA Zhao X., Downes M., Evans R.M., Lamia K.A.; RT "Circadian repressors CRY1 and CRY2 broadly interact with nuclear receptors RT and modulate transcriptional activity."; RL Proc. Natl. Acad. Sci. U.S.A. 114:8776-8781(2017). RN [9] RP X-RAY CRYSTALLOGRAPHY (2.96 ANGSTROMS) OF 227-458 IN COMPLEX WITH H.SAPIENS RP RXRA; R.NORVEGICUS NCOA2 AND AGONIST INSECTICIDE CONTAMINANT TCPOBOP, AND RP MUTAGENESIS OF PHE-171; ASN-175; LEU-216; PHE-227; TYR-234; PHE-244; RP TYR-336 AND LEU-346. RX PubMed=15610733; DOI=10.1016/j.molcel.2004.11.036; RA Suino K., Peng L., Reynolds R., Li Y., Cha J.Y., Repa J.J., Kliewer S.A., RA Xu H.E.; RT "The nuclear xenobiotic receptor CAR: structural determinants of RT constitutive activation and heterodimerization."; RL Mol. Cell 16:893-905(2004). CC -!- FUNCTION: Binds and transactivates the retinoic acid response elements CC that control expression of the retinoic acid receptor beta 2 and CC alcohol dehydrogenase 3 genes. Transactivates both the phenobarbital CC responsive element module of the human CYP2B6 gene and the CYP3A4 CC xenobiotic response element (By similarity). {ECO:0000250, CC ECO:0000269|PubMed:10462436}. CC -!- SUBUNIT: Heterodimer of NR1I3 and RXR. Interacts with PSMC4. Interacts CC with ECT2. Directly interacts with DNAJC7; this complex may also CC include HSP90. Interacts with CRY1 (PubMed:28751364). Interacts with CC CRY2 in a ligand-dependent manner (PubMed:28751364). CC {ECO:0000269|PubMed:14573755, ECO:0000269|PubMed:15610733, CC ECO:0000269|PubMed:17904126, ECO:0000269|PubMed:28751364, CC ECO:0000269|PubMed:8603043}. CC -!- SUBCELLULAR LOCATION: Nucleus. Cytoplasm. Cytoplasm, cytoskeleton CC {ECO:0000250}. Note=Recruited to the cytoplasm by DNAJC7. CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative splicing; Named isoforms=2; CC Name=CAR1; CC IsoId=O35627-1; Sequence=Displayed; CC Name=CAR2; CC IsoId=O35627-2; Sequence=VSP_003671, VSP_003672; CC -!- TISSUE SPECIFICITY: Predominantly expressed in liver. CC -!- DOMAIN: Composed by a short N-terminal domain followed by the DNA CC binding, hinge, and ligand binding/dimerization domains. CC -!- PTM: Phosphorylated at Thr-48 by PKC, dephosphorylation of Thr-48 is CC required for nuclear translocation and activation. {ECO:0000250}. CC -!- MISCELLANEOUS: [Isoform CAR2]: Does not seem to act as a CC transactivator. Lacks the C-terminal portion of the ligand CC binding/dimerization domain. {ECO:0000305}. CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family. NR1 CC subfamily. {ECO:0000305}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AF009327; AAC53349.1; -; mRNA. DR EMBL; AF009328; AAC53350.1; -; mRNA. DR EMBL; AK133515; BAE21697.1; -; mRNA. DR EMBL; CH466520; EDL39126.1; -; Genomic_DNA. DR CCDS; CCDS15480.1; -. [O35627-1] DR CCDS; CCDS56654.1; -. [O35627-2] DR RefSeq; NP_001229991.1; NM_001243062.1. [O35627-2] DR RefSeq; NP_001229992.1; NM_001243063.1. DR RefSeq; NP_033933.2; NM_009803.5. [O35627-1] DR PDB; 1XLS; X-ray; 2.96 A; E/F/G/H=117-358. DR PDB; 1XNX; X-ray; 2.90 A; A/B=109-358. DR PDBsum; 1XLS; -. DR PDBsum; 1XNX; -. DR AlphaFoldDB; O35627; -. DR SMR; O35627; -. DR BioGRID; 198489; 13. DR IntAct; O35627; 1. DR STRING; 10090.ENSMUSP00000005820; -. DR BindingDB; O35627; -. DR ChEMBL; CHEMBL3069; -. DR DrugCentral; O35627; -. DR GuidetoPHARMACOLOGY; 607; -. DR iPTMnet; O35627; -. DR PhosphoSitePlus; O35627; -. DR PaxDb; 10090-ENSMUSP00000005820; -. DR ProteomicsDB; 295523; -. [O35627-1] DR ProteomicsDB; 295524; -. [O35627-2] DR Antibodypedia; 20508; 531 antibodies from 32 providers. DR DNASU; 12355; -. DR Ensembl; ENSMUST00000005820.11; ENSMUSP00000005820.5; ENSMUSG00000005677.15. [O35627-1] DR Ensembl; ENSMUST00000075469.12; ENSMUSP00000074915.6; ENSMUSG00000005677.15. [O35627-2] DR GeneID; 12355; -. DR KEGG; mmu:12355; -. DR UCSC; uc007dnf.2; mouse. [O35627-1] DR UCSC; uc007dng.2; mouse. [O35627-2] DR AGR; MGI:1346307; -. DR CTD; 9970; -. DR MGI; MGI:1346307; Nr1i3. DR VEuPathDB; HostDB:ENSMUSG00000005677; -. DR eggNOG; KOG3575; Eukaryota. DR GeneTree; ENSGT00940000160641; -. DR HOGENOM; CLU_007368_12_0_1; -. DR InParanoid; O35627; -. DR OMA; VHAGFQE; -. DR OrthoDB; 5359733at2759; -. DR PhylomeDB; O35627; -. DR TreeFam; TF316304; -. DR Reactome; R-MMU-383280; Nuclear Receptor transcription pathway. DR BioGRID-ORCS; 12355; 3 hits in 81 CRISPR screens. DR ChiTaRS; Nr1i3; mouse. DR EvolutionaryTrace; O35627; -. DR PRO; PR:O35627; -. DR Proteomes; UP000000589; Chromosome 1. DR RNAct; O35627; Protein. DR Bgee; ENSMUSG00000005677; Expressed in left lobe of liver and 61 other cell types or tissues. DR ExpressionAtlas; O35627; baseline and differential. DR GO; GO:0005737; C:cytoplasm; IDA:UniProtKB. DR GO; GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell. DR GO; GO:0005829; C:cytosol; IDA:MGI. DR GO; GO:0005654; C:nucleoplasm; ISO:MGI. DR GO; GO:0005634; C:nucleus; IDA:UniProtKB. DR GO; GO:0003677; F:DNA binding; IDA:MGI. DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; ISO:MGI. DR GO; GO:0004879; F:nuclear receptor activity; ISO:MGI. DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central. DR GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; ISO:MGI. DR GO; GO:1990837; F:sequence-specific double-stranded DNA binding; ISO:MGI. DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro. DR GO; GO:0030154; P:cell differentiation; IBA:GO_Central. DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IDA:MGI. DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IBA:GO_Central. DR GO; GO:0001649; P:osteoblast differentiation; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; ISO:MGI. DR GO; GO:0006355; P:regulation of DNA-templated transcription; IDA:MGI. DR CDD; cd07156; NR_DBD_VDR_like; 1. DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1. DR Gene3D; 1.10.565.10; Retinoid X Receptor; 1. DR IDEAL; IID50248; -. DR InterPro; IPR035500; NHR-like_dom_sf. DR InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd. DR InterPro; IPR001723; Nuclear_hrmn_rcpt. DR InterPro; IPR001728; ThyrH_rcpt. DR InterPro; IPR001628; Znf_hrmn_rcpt. DR InterPro; IPR013088; Znf_NHR/GATA. DR PANTHER; PTHR24082; NUCLEAR HORMONE RECEPTOR; 1. DR PANTHER; PTHR24082:SF231; NUCLEAR RECEPTOR SUBFAMILY 1 GROUP I MEMBER 3; 1. DR Pfam; PF00104; Hormone_recep; 1. DR Pfam; PF00105; zf-C4; 1. DR PRINTS; PR00398; STRDHORMONER. DR PRINTS; PR00047; STROIDFINGER. DR PRINTS; PR00546; THYROIDHORMR. DR SMART; SM00430; HOLI; 1. DR SMART; SM00399; ZnF_C4; 1. DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1. DR SUPFAM; SSF48508; Nuclear receptor ligand-binding domain; 1. DR PROSITE; PS51843; NR_LBD; 1. DR PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1. DR PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1. DR Genevisible; O35627; MM. PE 1: Evidence at protein level; KW 3D-structure; Activator; Alternative splicing; Cytoplasm; Cytoskeleton; KW DNA-binding; Metal-binding; Nucleus; Phosphoprotein; Receptor; KW Reference proteome; Transcription; Transcription regulation; Zinc; KW Zinc-finger. FT CHAIN 1..358 FT /note="Nuclear receptor subfamily 1 group I member 3" FT /id="PRO_0000053554" FT DOMAIN 119..358 FT /note="NR LBD" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01189" FT DNA_BIND 18..93 FT /note="Nuclear receptor" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407" FT ZN_FING 21..41 FT /note="NR C4-type" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407" FT ZN_FING 57..81 FT /note="NR C4-type" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407" FT SITE 171 FT /note="Important for TCPOBOP recognition" FT SITE 175 FT /note="Important for TCPOBOP recognition" FT SITE 216 FT /note="Important for TCPOBOP recognition" FT SITE 227 FT /note="Important for TCPOBOP recognition" FT SITE 244 FT /note="Important for TCPOBOP recognition" FT SITE 336 FT /note="Important for TCPOBOP recognition" FT MOD_RES 48 FT /note="Phosphothreonine; by PKC" FT /evidence="ECO:0000250|UniProtKB:Q14994" FT VAR_SEQ 281..286 FT /note="DRPGVT -> GFCMQS (in isoform CAR2)" FT /evidence="ECO:0000303|PubMed:9295294" FT /id="VSP_003671" FT VAR_SEQ 287..358 FT /note="Missing (in isoform CAR2)" FT /evidence="ECO:0000303|PubMed:9295294" FT /id="VSP_003672" FT MUTAGEN 171 FT /note="F->W: Diminished binding of coactivator NCOA2 in the FT presence of TCPOBOP." FT /evidence="ECO:0000269|PubMed:15610733" FT MUTAGEN 175 FT /note="N->F: Diminished binding of coactivator NCOA2 in the FT presence of TCPOBOP." FT /evidence="ECO:0000269|PubMed:15610733" FT MUTAGEN 216 FT /note="L->F: Diminished binding of coactivator NCOA2 in the FT presence of TCPOBOP." FT /evidence="ECO:0000269|PubMed:15610733" FT MUTAGEN 227 FT /note="F->W: Diminished binding of coactivator NCOA2 in the FT presence of TCPOBOP." FT /evidence="ECO:0000269|PubMed:15610733" FT MUTAGEN 234 FT /note="Y->A: No effect on binding of coactivator NCOA2 in FT the presence of TCPOBOP." FT /evidence="ECO:0000269|PubMed:15610733" FT MUTAGEN 244 FT /note="F->A: Diminished binding of coactivator NCOA2 in the FT presence of TCPOBOP." FT /evidence="ECO:0000269|PubMed:15610733" FT MUTAGEN 336 FT /note="Y->A: Diminished binding of coactivator NCOA2 in the FT presence of TCPOBOP." FT /evidence="ECO:0000269|PubMed:15610733" FT MUTAGEN 346 FT /note="L->F: Dramatic increase in binding NCOA2. Little FT effect on binding of coactivator NCOA2 in the presence of FT TCPOBOP." FT /evidence="ECO:0000269|PubMed:15610733" FT CONFLICT 138 FT /note="M -> L (in Ref. 1; AAC53349/AAC53350)" FT /evidence="ECO:0000305" FT HELIX 118..134 FT /evidence="ECO:0007829|PDB:1XNX" FT TURN 135..137 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 138..144 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 149..152 FT /evidence="ECO:0007829|PDB:1XNX" FT STRAND 160..162 FT /evidence="ECO:0007829|PDB:1XLS" FT HELIX 164..187 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 190..193 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 197..216 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 217..219 FT /evidence="ECO:0007829|PDB:1XNX" FT TURN 222..225 FT /evidence="ECO:0007829|PDB:1XNX" FT STRAND 226..229 FT /evidence="ECO:0007829|PDB:1XNX" FT STRAND 232..234 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 236..241 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 246..260 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 266..277 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 288..308 FT /evidence="ECO:0007829|PDB:1XNX" FT TURN 309..312 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 318..335 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 337..343 FT /evidence="ECO:0007829|PDB:1XNX" FT HELIX 345..349 FT /evidence="ECO:0007829|PDB:1XLS" FT HELIX 351..357 FT /evidence="ECO:0007829|PDB:1XLS" SQ SEQUENCE 358 AA; 40913 MW; A11C92B1EC2C06A7 CRC64; MTAMLTLETM ASEEEYGPRN CVVCGDRATG YHFHALTCEG CKGFFRRTVS KTIGPICPFA GRCEVSKAQR RHCPACRLQK CLNVGMRKDM ILSAEALALR RARQAQRRAE KASLQLNQQQ KELVQILLGA HTRHVGPMFD QFVQFKPPAY LFMHHRPFQP RGPVLPLLTH FADINTFMVQ QIIKFTKDLP LFRSLTMEDQ ISLLKGAAVE ILHISLNTTF CLQTENFFCG PLCYKMEDAV HAGFQYEFLE SILHFHKNLK GLHLQEPEYV LMAATALFSP DRPGVTQREE IDQLQEEMAL ILNNHIMEQQ SRLQSRFLYA KLMGLLADLR SINNAYSYEL QRLEELSAMT PLLGEICS //