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Reviewed, UniProtKB/Swiss-Prot O35375 (NRP2_MOUSE)

Last modified March 24, 2009. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Neuropilin-2
Alternative name(s):
    Vascular endothelial cell growth factor 165 receptor 2
Gene names
Name: Nrp2
OrganismMus musculus (Mouse)
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMus

Protein attributes

Sequence length931 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Function

High affinity receptor for semaphorins 3C, 3F, VEGF-165 and VEGF-145 isoforms of VEGF, and the PLGF-2 isoform of PGF.

Subunit structure

Heterodimer with NRP1 Probable. Binds PLXNB1 By similarity.

Subcellular location

Membrane; Single-pass type I membrane protein.

Tissue specificity

Expressed in developing CNS, PNS and in some nonneural tissues including limb buds, developing bones, muscles, intestinal epithelium, kidney, lung and submandibular gland.

Developmental stage

The expression pattern is very dynamic and is developmentally regulated.

Sequence similarities

Belongs to the neuropilin family.

Contains 2 CUB domains.

Contains 2 F5/8 type C domains.

Contains 1 MAM domain.

Alternative products

This entry describes 6 isoforms produced by alternative splicing. [Align] [Select]
Isoform A22 (identifier: O35375-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform A0 (identifier: O35375-2)

The sequence of this isoform differs from the canonical sequence as follows:
     809-830: Missing.
Isoform A5 (identifier: O35375-3)

The sequence of this isoform differs from the canonical sequence as follows:
     814-830: Missing.
Isoform A17 (identifier: O35375-4)

The sequence of this isoform differs from the canonical sequence as follows:
     809-813: Missing.
Isoform B0 (identifier: O35375-5)

The sequence of this isoform differs from the canonical sequence as follows:
     810-931: EDFKVDIPET...INHQKCCSEA → GTLPPGTEPT...KLEQERGSHC
Isoform B5 (identifier: O35375-6)

The sequence of this isoform differs from the canonical sequence as follows:
     814-931: VDIPETHGGE...INHQKCCSEA → GGTLPPGTEP...KLEQERGSHC

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2020 Potential
Chain21 – 931911Neuropilin-2
PRO_0000021864

Regions

Topological domain21 – 864844Extracellular Potential
Transmembrane865 – 88925 Potential
Topological domain890 – 93142Cytoplasmic Potential
Domain28 – 142115CUB 1
Domain149 – 267119CUB 2
Domain277 – 427151F5/8 type C 1
Domain434 – 592159F5/8 type C 2
Domain642 – 802161MAM
Compositional bias838 – 8458Poly-Ser

Amino acid modifications

Glycosylation1521N-linked (GlcNAc...) Potential
Glycosylation1571N-linked (GlcNAc...) Potential
Glycosylation6291N-linked (GlcNAc...) Potential
Glycosylation8391N-linked (GlcNAc...) Potential
Disulfide bond28 ↔ 55 By similarity
Disulfide bond83 ↔ 105 By similarity
Disulfide bond149 ↔ 175 By similarity
Disulfide bond208 ↔ 230 By similarity
Disulfide bond277 ↔ 427 By similarity
Disulfide bond434 ↔ 592 By similarity

Natural variations

Alternative sequence809 – 83022Missing in isoform A0.
VSP_004344
Alternative sequence809 – 8135Missing in isoform A17.
VSP_004343
Alternative sequence810 – 931122EDFKV…CCSEA → GTLPPGTEPTVDTVPVQPIP AYWYYVMAAGGAVLVLASVV LALVLHYHRFRYAAKKTDHS ITYKTSHYTNGAPLAVEPTL TIKLEQERGSHC in isoform B0.
VSP_004346
Alternative sequence814 – 931118VDIPE…CCSEA → GGTLPPGTEPTVDTVPVQPI PAYWYYVMAAGGAVLVLASV VLALVLHYHRFRYAAKKTDH SITYKTSHYTNGAPLAVEPT LTIKLEQERGSHC in isoform B5.
VSP_004347
Alternative sequence814 – 83017Missing in isoform A5.
VSP_004345

Experimental info

Sequence conflict7861G → I in AAC53380. Ref.1
Sequence conflict7861G → I in AAC53381. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Isoform A22 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 76F2443F411D2F63

FASTA931104,559
        10         20         30         40         50         60 
MDMFPLTWVF LALYFSGHEV RSQQDPPCGG RPNSKDAGYI TSPGYPQDYP SHQNCEWIVY 

        70         80         90        100        110        120 
APEPNQKIVL NFNPHFEIEK HDCKYDFIEI RDGDSESADL LGKHCGNIAP PTIISSGSVL 

       130        140        150        160        170        180 
YIKFTSDYAR QGAGFSLRYE IFKTGSEDCS KNFTSPNGTI ESPGFPEKYP HNLDCTFTIL 

       190        200        210        220        230        240 
AKPRMEIILQ FLTFDLEHDP LQVGEGDCKY DWLDIWDGIP HVGPLIGKYC GTKTPSKLRS 

       250        260        270        280        290        300 
STGILSLTFH TDMAVAKDGF SARYYLIHQE PPENFQCNVP LGMESGRIAN EQISASSTFS 

       310        320        330        340        350        360 
DGRWTPQQSR LHGDDNGWTP NLDSNKEYLQ VDLRFLTMLT AIATQGAISR ETQKGYYVKS 

       370        380        390        400        410        420 
YKLEVSTNGE DWMVYRHGKN HKIFQANNDA TEVVLNKLHM PLLTRFIRIR PQTWHLGIAL 

       430        440        450        460        470        480 
RLELFGCRVT DAPCSNMLGM LSGLIADTQI SASSTREYLW SPSAARLVSS RSGWFPRNPQ 

       490        500        510        520        530        540 
AQPGEEWLQV DLGTPKTVKG VIIQGARGGD SITAVEARAF VRKFKVSYSL NGKDWEYIQD 

       550        560        570        580        590        600 
PRTQQTKLFE GNMHYDTPDI RRFDPVPAQY VRVYPERWSP AGIGMRLEVL GCDWTDSKPT 

       610        620        630        640        650        660 
VETLGPTVKS EETTTPYPMD EDATECGENC SFEDDKDLQL PSGFNCNFDF PEETCGWVYD 

       670        680        690        700        710        720 
HAKWLRSTWI SSANPNDRTF PDDKNFLKLQ SDGRREGQYG RLISPPVHLP RSPVCMEFQY 

       730        740        750        760        770        780 
QAMGGHGVAL QVVREASQES KLLWVIREDQ GSEWKHGRII LPSYDMEYQI VFEGVIGKGR 

       790        800        810        820        830        840 
SGEISGDDIR ISTDVPLENC MEPISAFAGE DFKVDIPETH GGEGYEDEID DEYEGDWSNS 

       850        860        870        880        890        900 
SSSTSGAGDP SSGKEKSWLY TLDPILITII AMSSLGVLLG ATCAGLLLYC TCSYSGLSSR 

       910        920        930 
SCTTLENYNF ELYDGLKHKV KINHQKCCSE A 

« Hide

Isoform A0.

Checksum: 7296E27C38291CD9
Show »

FASTA909102,126
Isoform A5.

Checksum: CD857FB5CA1327BB
Show »

FASTA914102,702
Isoform A17.

Checksum: 27743018107DA104
Show »

FASTA926103,983
Isoform B0.

Checksum: 8814A8A04F570292
Show »

FASTA901101,346
Isoform B5.

Checksum: E47BA0DEC2C8D5C4
Show »

FASTA906101,923

References

[1]"Neuropilin-2, a novel member of the neuropilin family, is a high affinity receptor for the semaphorins Sema E and Sema IV but not Sema III."
Chen H., Chedotal A., He Z.-G., Goodman C.S., Tessier-Lavigne M.
Neuron 19:547-559(1997) [PubMed: 9331348] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS A0; A17; A22; A5; B0 AND B5).
Strain: BALB/c.
+Additional computationally mapped references.

Cross-references

Sequence databases

AF022856 mRNA. Translation: AAC53379.1.
AF022854 mRNA. Translation: AAC53377.1.
AF022855 mRNA. Translation: AAC53378.1.
AF022857 mRNA. Translation: AAC53380.1.
AF022858 mRNA. Translation: AAC53381.1.
AF022861 mRNA. Translation: AAC53382.1.
IPIIPI00129911.
IPI00227582.
IPI00227583.
IPI00227584.
IPI00755777.
IPI00876020.
UniGeneMm.266341

3D structure databases

HSSPHSSP built from PDB template 1KEX based on UniProtKB O14786.
ModBaseSearch...

Proteomic databases

PRIDEO35375.

Genome annotation databases

EnsemblENSMUSG00000025969. Mus musculus. [Contig view]

Organism-specific databases

MGIMGI:1100492. Nrp2.

Phylogenomic databases

HOGENOMO35375.
HOVERGENO35375.

Gene expression databases

ArrayExpressO35375.
BgeeO35375.
CleanExMM_NRP2.
GermOnlineENSMUSG00000025969. Mus musculus.

Family and domain databases

InterProIPR000421. Coagulation_factor_5/8-type_C.
IPR000859. CUB.
IPR000998. MAM.
IPR014648. Neuropilin.
[Graphical view]
Gene3DG3DSA:2.60.120.290. CUB. 2 hits.
PfamPF00431. CUB. 2 hits.
PF00754. F5_F8_type_C. 2 hits.
PF00629. MAM. 1 hit.
[Graphical view]
PIRSFPIRSF036960. Neuropilin. 1 hit.
SMARTSM00042. CUB. 2 hits.
SM00231. FA58C. 2 hits.
SM00137. MAM. 1 hit.
[Graphical view]
PROSITEPS01180. CUB. 2 hits.
PS01285. FA58C_1. 2 hits.
PS01286. FA58C_2. 2 hits.
PS50022. FA58C_3. 2 hits.
PS50060. MAM_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

SOURCESearch...

Entry information

Entry nameNRP2_MOUSE
AccessionPrimary (citable) accession number: O35375
Secondary accession number(s): O35373 expand/collapse secondary AC list , O35374, O35376, O35377, O35378
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: January 1, 1998
Last modified: March 24, 2009
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

Relevant documents

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents