Reviewed,
UniProtKB/Swiss-Prot O35375 (NRP2_MOUSE)
Last modified
March 24, 2009.
Version 81.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin
| Protein names | Recommended name: Neuropilin-2 Alternative name(s): Vascular endothelial cell growth factor 165 receptor 2 | ||
| Gene names |
| ||
| Organism | Mus musculus (Mouse) | ||
| Taxonomic identifier | 10090 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus |
Protein attributes
| Sequence length | 931 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | High affinity receptor for semaphorins 3C, 3F, VEGF-165 and VEGF-145 isoforms of VEGF, and the PLGF-2 isoform of PGF. |
| Subunit structure | Heterodimer with NRP1 Probable. Binds PLXNB1 By similarity. |
| Subcellular location | |
| Tissue specificity | Expressed in developing CNS, PNS and in some nonneural tissues including limb buds, developing bones, muscles, intestinal epithelium, kidney, lung and submandibular gland. |
| Developmental stage | The expression pattern is very dynamic and is developmentally regulated. |
| Sequence similarities | Belongs to the neuropilin family. Contains 2 CUB domains. Contains 2 F5/8 type C domains. Contains 1 MAM domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Differentiation Neurogenesis |
| Cellular component | Membrane |
| Coding sequence diversity | Alternative splicing |
| Domain | Repeat Signal Transmembrane |
| Molecular function | Developmental protein Receptor |
| PTM | Disulfide bond Glycoprotein |
| Gene Ontology (GO) | |
| Biological process | cell adhesion Inferred from electronic annotation. Source: InterPro heart developmentInferred from genetic interaction. Source: MGI negative chemotaxisInferred from genetic interaction. Source: MGI nervous system developmentInferred from electronic annotation. Source: UniProtKB-KW neural crest cell migrationInferred from mutant phenotype. Source: MGI |
| Cellular component | axon Inferred from direct assay. Source: MGI integral to membraneInferred from electronic annotation. Source: UniProtKB-KW plasma membraneInferred by curator. Source: MGI |
| Molecular function | protein binding Inferred from physical interaction. Source: MGI semaphorin receptor activityInferred from physical interaction. Source: MGI |
| Complete GO annotation... | |
Alternative products
| This entry describes 6 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform A22 (identifier: O35375-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform A0 (identifier: O35375-2) The sequence of this isoform differs from the canonical sequence as follows: 809-830: Missing. | ||||||
| Isoform A5 (identifier: O35375-3) The sequence of this isoform differs from the canonical sequence as follows: 814-830: Missing. | ||||||
| Isoform A17 (identifier: O35375-4) The sequence of this isoform differs from the canonical sequence as follows: 809-813: Missing. | ||||||
| Isoform B0 (identifier: O35375-5) The sequence of this isoform differs from the canonical sequence as follows: 810-931: EDFKVDIPET...INHQKCCSEA → GTLPPGTEPT...KLEQERGSHC | ||||||
| Isoform B5 (identifier: O35375-6) The sequence of this isoform differs from the canonical sequence as follows: 814-931: VDIPETHGGE...INHQKCCSEA → GGTLPPGTEP...KLEQERGSHC |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 20 | 20 | Potential | ||||||||
| Chain | 21 – 931 | 911 | Neuropilin-2 | PRO_0000021864 | |||||||
Regions | |||||||||||
| Topological domain | 21 – 864 | 844 | Extracellular Potential | ||||||||
| Transmembrane | 865 – 889 | 25 | Potential | ||||||||
| Topological domain | 890 – 931 | 42 | Cytoplasmic Potential | ||||||||
| Domain | 28 – 142 | 115 | CUB 1 | ||||||||
| Domain | 149 – 267 | 119 | CUB 2 | ||||||||
| Domain | 277 – 427 | 151 | F5/8 type C 1 | ||||||||
| Domain | 434 – 592 | 159 | F5/8 type C 2 | ||||||||
| Domain | 642 – 802 | 161 | MAM | ||||||||
| Compositional bias | 838 – 845 | 8 | Poly-Ser | ||||||||
Amino acid modifications | |||||||||||
| Glycosylation | 152 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 157 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 629 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 839 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 28 ↔ 55 | By similarity | |||||||||
| Disulfide bond | 83 ↔ 105 | By similarity | |||||||||
| Disulfide bond | 149 ↔ 175 | By similarity | |||||||||
| Disulfide bond | 208 ↔ 230 | By similarity | |||||||||
| Disulfide bond | 277 ↔ 427 | By similarity | |||||||||
| Disulfide bond | 434 ↔ 592 | By similarity | |||||||||
Natural variations | |||||||||||
| Alternative sequence | 809 – 830 | 22 | Missing in isoform A0. | VSP_004344 | |||||||
| Alternative sequence | 809 – 813 | 5 | Missing in isoform A17. | VSP_004343 | |||||||
| Alternative sequence | 810 – 931 | 122 | EDFKV…CCSEA → GTLPPGTEPTVDTVPVQPIP AYWYYVMAAGGAVLVLASVV LALVLHYHRFRYAAKKTDHS ITYKTSHYTNGAPLAVEPTL TIKLEQERGSHC in isoform B0. | VSP_004346 | |||||||
| Alternative sequence | 814 – 931 | 118 | VDIPE…CCSEA → GGTLPPGTEPTVDTVPVQPI PAYWYYVMAAGGAVLVLASV VLALVLHYHRFRYAAKKTDH SITYKTSHYTNGAPLAVEPT LTIKLEQERGSHC in isoform B5. | VSP_004347 | |||||||
| Alternative sequence | 814 – 830 | 17 | Missing in isoform A5. | VSP_004345 | |||||||
Experimental info | |||||||||||
| Sequence conflict | 786 | 1 | G → I in AAC53380. Ref.1 | ||||||||
| Sequence conflict | 786 | 1 | G → I in AAC53381. Ref.1 | ||||||||
Sequences
| ||||||||||||||||||||||||||||||||||||||||||||||||
References
| [1] | "Neuropilin-2, a novel member of the neuropilin family, is a high affinity receptor for the semaphorins Sema E and Sema IV but not Sema III." Chen H., Chedotal A., He Z.-G., Goodman C.S., Tessier-Lavigne M. Neuron 19:547-559(1997) [PubMed: 9331348] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS A0; A17; A22; A5; B0 AND B5). Strain: BALB/c. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| AF022856 mRNA. Translation: AAC53379.1. AF022854 mRNA. Translation: AAC53377.1. AF022855 mRNA. Translation: AAC53378.1. AF022857 mRNA. Translation: AAC53380.1. AF022858 mRNA. Translation: AAC53381.1. AF022861 mRNA. Translation: AAC53382.1. | |
| IPI | IPI00129911. IPI00227582. IPI00227583. IPI00227584. IPI00755777. IPI00876020. |
| UniGene | Mm.266341 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1KEX based on UniProtKB O14786. |
| ModBase | Search... |
Proteomic databases | |
| PRIDE | O35375. |
Genome annotation databases | |
| Ensembl | ENSMUSG00000025969. Mus musculus. [Contig view] |
Organism-specific databases | |
| MGI | MGI:1100492. Nrp2. |
Phylogenomic databases | |
| HOGENOM | O35375. |
| HOVERGEN | O35375. |
Gene expression databases | |
| ArrayExpress | O35375. |
| Bgee | O35375. |
| CleanEx | MM_NRP2. |
| GermOnline | ENSMUSG00000025969. Mus musculus. |
Family and domain databases | |
| InterPro | IPR000421. Coagulation_factor_5/8-type_C. IPR000859. CUB. IPR000998. MAM. IPR014648. Neuropilin. [Graphical view] |
| Gene3D | G3DSA:2.60.120.290. CUB. 2 hits. |
| Pfam | PF00431. CUB. 2 hits. PF00754. F5_F8_type_C. 2 hits. PF00629. MAM. 1 hit. [Graphical view] |
| PIRSF | PIRSF036960. Neuropilin. 1 hit. |
| SMART | SM00042. CUB. 2 hits. SM00231. FA58C. 2 hits. SM00137. MAM. 1 hit. [Graphical view] |
| PROSITE | PS01180. CUB. 2 hits. PS01285. FA58C_1. 2 hits. PS01286. FA58C_2. 2 hits. PS50022. FA58C_3. 2 hits. PS50060. MAM_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| SOURCE | Search... |
Entry information
| Entry name | NRP2_MOUSE | ||||||||
| Accession | Primary (citable) accession number: O35375 Secondary accession number(s): O35373 O35378 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


