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Protein
Submitted name:

Protein Vom2r27

Gene

Vom2r27

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorSAAS annotation, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Vom2r27Imported
Submitted name:
Putative pheromone receptorImported
Gene namesi
Name:Vom2r27Imported
Synonyms:Go-VN5Imported, LOC286914Imported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi708442. Vom2r27.

Subcellular locationi

  • Cell membrane SAAS annotation; Multi-pass membrane protein SAAS annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei513 – 530HelicalSequence analysisAdd BLAST18
Transmembranei542 – 565HelicalSequence analysisAdd BLAST24
Transmembranei577 – 601HelicalSequence analysisAdd BLAST25
Transmembranei621 – 638HelicalSequence analysisAdd BLAST18
Transmembranei672 – 689HelicalSequence analysisAdd BLAST18
Transmembranei701 – 721HelicalSequence analysisAdd BLAST21
Transmembranei733 – 756HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membraneSAAS annotation, Membrane

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000030140.
10116.ENSRNOP00000033278.

Structurei

3D structure databases

ProteinModelPortaliO35269.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini507 – 771G_PROTEIN_RECEP_F3_4InterPro annotationAdd BLAST265

Sequence similaritiesi

Belongs to the G-protein coupled receptor 3 family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG1056. Eukaryota.
ENOG410XR6W. LUCA.
GeneTreeiENSGT00760000118974.
HOGENOMiHOG000232091.
HOVERGENiHBG098472.
OMAiETHYANI.
OrthoDBiEOG091G02M6.
PhylomeDBiO35269.
TreeFamiTF340115.
TF353350.

Family and domain databases

InterProiIPR001828. ANF_lig-bd_rcpt.
IPR000337. GPCR_3.
IPR011500. GPCR_3_9-Cys_dom.
IPR017978. GPCR_3_C.
IPR004073. GPCR_3_vmron_rcpt_2.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF00003. 7tm_3. 1 hit.
PF01094. ANF_receptor. 1 hit.
PF07562. NCD3G. 1 hit.
[Graphical view]
PRINTSiPR00248. GPCRMGR.
PR01535. VOMERONASL2R.
SUPFAMiSSF53822. SSF53822. 1 hit.
PROSITEiPS50259. G_PROTEIN_RECEP_F3_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O35269-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFAIEEINS NPHLLPNTSL GFEINNVPHG QRYTLVKLFS SLSGSNYDIP
60 70 80 90 100
NYISASESNS AAVLTGPSWT ISECVGTLLD LYKFPQLTFG PFDSLLSEQR
110 120 130 140 150
RFSSLYQVAP KDTFLTPGIV SLMLHFHWNW VGLFIIDDDK GAQTLSDLRN
160 170 180 190 200
EMDKNGVCTA FVEMIPVIKG SFFTKSWKNH VQILESSSNV IIIYGDSDSL
210 220 230 240 250
LSLIVNIKQK LLTWKVWVLI SQWDVSKFDD YFMVDSLHGA LIFSHHREEI
260 270 280 290 300
PNFTDFMQKY NPSKYPEDTY LHVLWHMYFN CSFVKKDCKI VHNCLPNASL
310 320 330 340 350
GFLPGNIFDM AMSEESYNVY NAVYAVAHSL HEMILNQVQF QTHEKGKKMV
360 370 380 390 400
FFPWQLHPFL RERQLINQNG ANEDLDCTRK SHVEYDILNF WNFPKGLGLN
410 420 430 440 450
VKVGTFSPSA PKEQKLSISS NMIQWATGST EIPQSVCSES CHPGFRKTHQ
460 470 480 490 500
EGRVACCFDC IPCPENEISN ETDVDQCVKC PETHYANIEK IHCLQKTVTF
510 520 530 540 550
LYYDDPLGKT LCFMSLGFSS LTAAVLVVFL KNRDTPIVKA NNLALSYTLL
560 570 580 590 600
ITLMLCFLCP LLFIGRPSTA SCILQQNIFG LLFTVALSTV LAKTITVVIA
610 620 630 640 650
FKITSPGRIR RWLLISRAPN FIIPLCTLLQ VFLSGIWLTT SPPFIDKDAH
660 670 680 690 700
SEHGHIIIIC NKGSAVAFHC NLGYLGALAL VSYFMAFLSR NLPDTFNEAK
710 720 730 740 750
FLAFSMLVFC SVWVTFLPVY HSTKGKNMVA MEVFSILASS TSLLGIIFAP
760 770
KCYLILLRPE RNSLSYIRDK TYAKSIKPS
Length:779
Mass (Da):88,097
Last modified:January 1, 1998 - v1
Checksum:i67718B68019DA0E2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07002005 Genomic DNA. No translation available.
AABR07002006 Genomic DNA. No translation available.
AF016182 mRNA. Translation: AAC53329.1.
RefSeqiNP_775153.1. NM_173130.1.
UniGeneiRn.10810.

Genome annotation databases

EnsembliENSRNOT00000036807; ENSRNOP00000033278; ENSRNOG00000048635.
GeneIDi286914.
KEGGirno:286914.
UCSCiRGD:708442. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07002005 Genomic DNA. No translation available.
AABR07002006 Genomic DNA. No translation available.
AF016182 mRNA. Translation: AAC53329.1.
RefSeqiNP_775153.1. NM_173130.1.
UniGeneiRn.10810.

3D structure databases

ProteinModelPortaliO35269.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000030140.
10116.ENSRNOP00000033278.

Protein family/group databases

GPCRDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000036807; ENSRNOP00000033278; ENSRNOG00000048635.
GeneIDi286914.
KEGGirno:286914.
UCSCiRGD:708442. rat.

Organism-specific databases

CTDi286914.
RGDi708442. Vom2r27.

Phylogenomic databases

eggNOGiKOG1056. Eukaryota.
ENOG410XR6W. LUCA.
GeneTreeiENSGT00760000118974.
HOGENOMiHOG000232091.
HOVERGENiHBG098472.
OMAiETHYANI.
OrthoDBiEOG091G02M6.
PhylomeDBiO35269.
TreeFamiTF340115.
TF353350.

Family and domain databases

InterProiIPR001828. ANF_lig-bd_rcpt.
IPR000337. GPCR_3.
IPR011500. GPCR_3_9-Cys_dom.
IPR017978. GPCR_3_C.
IPR004073. GPCR_3_vmron_rcpt_2.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF00003. 7tm_3. 1 hit.
PF01094. ANF_receptor. 1 hit.
PF07562. NCD3G. 1 hit.
[Graphical view]
PRINTSiPR00248. GPCRMGR.
PR01535. VOMERONASL2R.
SUPFAMiSSF53822. SSF53822. 1 hit.
PROSITEiPS50259. G_PROTEIN_RECEP_F3_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO35269_RAT
AccessioniPrimary (citable) accession number: O35269
Secondary accession number(s): F1M7D4
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.