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Protein

Olfactory receptor

Gene

Olr1278

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionG-protein coupled receptorUniRule annotationSAAS annotation, Receptor, Transducer
Biological processOlfactionUniRule annotationSAAS annotation, Sensory transduction

Names & Taxonomyi

Protein namesi
Recommended name:
Olfactory receptorUniRule annotation
Gene namesi
Name:Olr1278Imported
Synonyms:LOC286913Imported, U131Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1332744. Olr1278.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei27 – 48HelicalUniRule annotationAdd BLAST22
Transmembranei101 – 120HelicalUniRule annotationAdd BLAST20
Transmembranei141 – 164HelicalUniRule annotationAdd BLAST24
Transmembranei197 – 226HelicalUniRule annotationAdd BLAST30
Transmembranei238 – 261HelicalUniRule annotationAdd BLAST24
Transmembranei273 – 292HelicalUniRule annotationAdd BLAST20

Keywords - Cellular componenti

Cell membraneUniRule annotationSAAS annotation, Membrane

PTM / Processingi

Proteomic databases

PaxDbiO35184.

Expressioni

Gene expression databases

GenevisibleiO35184. RN.

Structurei

3D structure databases

ProteinModelPortaliO35184.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini41 – 290G_PROTEIN_RECEP_F1_2InterPro annotationAdd BLAST250

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IHGI. Eukaryota.
ENOG41117G7. LUCA.
HOGENOMiHOG000041364.
HOVERGENiHBG017625.
KOiK04257.
PhylomeDBiO35184.

Family and domain databases

InterProiView protein in InterPro
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
PfamiView protein in Pfam
PF13853. 7tm_4. 1 hit.
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiView protein in PROSITE
PS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O35184-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATGNYCVFP EFILTGLSKK SELQMPLFVL FLGIYIVTVV GNLGMITLIR
60 70 80 90 100
LSSLLHTPMY YFLSSLSFID LCHSTVITPK MLVNFVAEKN IISYTGCMTQ
110 120 130 140 150
LFFFLIFAIA ECHMLAAMAY DRYVAICNPL LYNAIMSYQS YISMISGVYI
160 170 180 190 200
IGVVCASAHT GFMIRSQFCN LDVINHYFCD LLPLLELAHS STYVNELVIL
210 220 230 240 250
ICGTCNIVVP TLTILTSYIF IIATILHIRS TEGRYKAFST CSSHILAVAV
260 270 280 290 300
FFGSAAFMYL QPSSVSSMDQ GKVSSVFYTI VVPMLNPLIY SLRNKDVSTA
310
LKKILERKSF V
Length:311
Mass (Da):34,721
Last modified:January 1, 1998 - v1
Checksum:i902D22378DD36C87
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF010293 mRNA. Translation: AAB66333.1.
RefSeqiNP_775152.1. NM_173129.1.
UniGeneiRn.10792.

Genome annotation databases

GeneIDi286913.
KEGGirno:286913.
UCSCiRGD:1332744. rat.

Similar proteinsi

Entry informationi

Entry nameiO35184_RAT
AccessioniPrimary (citable) accession number: O35184
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: September 27, 2017
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)