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Protein

Olfactory receptor

Gene

Olr1278

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorUniRule annotationSAAS annotation, Receptor, Transducer

Keywords - Biological processi

OlfactionUniRule annotationSAAS annotation, Sensory transduction

Names & Taxonomyi

Protein namesi
Recommended name:
Olfactory receptorUniRule annotation
Gene namesi
Name:Olr1278Imported
Synonyms:LOC286913Imported, U131Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1332744. Olr1278.

Subcellular locationi

  • Cell membrane UniRule annotationSAAS annotation; Multi-pass membrane protein UniRule annotationSAAS annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei27 – 48HelicalUniRule annotationAdd BLAST22
Transmembranei101 – 120HelicalUniRule annotationAdd BLAST20
Transmembranei141 – 164HelicalUniRule annotationAdd BLAST24
Transmembranei197 – 226HelicalUniRule annotationAdd BLAST30
Transmembranei238 – 261HelicalUniRule annotationAdd BLAST24
Transmembranei273 – 292HelicalUniRule annotationAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membraneUniRule annotationSAAS annotation, Membrane

PTM / Processingi

Proteomic databases

PaxDbiO35184.

Expressioni

Gene expression databases

GenevisibleiO35184. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000067632.

Structurei

3D structure databases

ProteinModelPortaliO35184.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini41 – 290G_PROTEIN_RECEP_F1_2InterPro annotationAdd BLAST250

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IHGI. Eukaryota.
ENOG41117G7. LUCA.
HOGENOMiHOG000041364.
HOVERGENiHBG017625.
KOiK04257.
PhylomeDBiO35184.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O35184-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATGNYCVFP EFILTGLSKK SELQMPLFVL FLGIYIVTVV GNLGMITLIR
60 70 80 90 100
LSSLLHTPMY YFLSSLSFID LCHSTVITPK MLVNFVAEKN IISYTGCMTQ
110 120 130 140 150
LFFFLIFAIA ECHMLAAMAY DRYVAICNPL LYNAIMSYQS YISMISGVYI
160 170 180 190 200
IGVVCASAHT GFMIRSQFCN LDVINHYFCD LLPLLELAHS STYVNELVIL
210 220 230 240 250
ICGTCNIVVP TLTILTSYIF IIATILHIRS TEGRYKAFST CSSHILAVAV
260 270 280 290 300
FFGSAAFMYL QPSSVSSMDQ GKVSSVFYTI VVPMLNPLIY SLRNKDVSTA
310
LKKILERKSF V
Length:311
Mass (Da):34,721
Last modified:January 1, 1998 - v1
Checksum:i902D22378DD36C87
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF010293 mRNA. Translation: AAB66333.1.
RefSeqiNP_775152.1. NM_173129.1.
UniGeneiRn.10792.

Genome annotation databases

GeneIDi286913.
KEGGirno:286913.
UCSCiRGD:1332744. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF010293 mRNA. Translation: AAB66333.1.
RefSeqiNP_775152.1. NM_173129.1.
UniGeneiRn.10792.

3D structure databases

ProteinModelPortaliO35184.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000067632.

Protein family/group databases

GPCRDBiSearch...

Proteomic databases

PaxDbiO35184.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi286913.
KEGGirno:286913.
UCSCiRGD:1332744. rat.

Organism-specific databases

CTDi286913.
RGDi1332744. Olr1278.

Phylogenomic databases

eggNOGiENOG410IHGI. Eukaryota.
ENOG41117G7. LUCA.
HOGENOMiHOG000041364.
HOVERGENiHBG017625.
KOiK04257.
PhylomeDBiO35184.

Gene expression databases

GenevisibleiO35184. RN.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO35184_RAT
AccessioniPrimary (citable) accession number: O35184
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: June 8, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.