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Protein

HTH-type transcriptional regulator YtlI

Gene

ytlI

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Positively regulates the expression of ytmI operon in response to the availability of sulfur sources.2 Publications

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi18 – 37H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciBSUB:BSU29400-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator YtlI
Gene namesi
Name:ytlI
Ordered Locus Names:BSU29400
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001058201 – 308HTH-type transcriptional regulator YtlIAdd BLAST308

Proteomic databases

PaxDbiO35038.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100016046.

Structurei

3D structure databases

ProteinModelPortaliO35038.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 57HTH lysR-typePROSITE-ProRule annotationAdd BLAST57

Sequence similaritiesi

Contains 1 HTH lysR-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4108KSA. Bacteria.
ENOG410XQIB. LUCA.
HOGENOMiHOG000009116.
InParanoidiO35038.
OMAiYRRKLEM.
PhylomeDBiO35038.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O35038-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELRSIKTFH TIVKFGSFYK AAEILNYSQP TISMRMKQLE QDLGVLLFER
60 70 80 90 100
GKSLQLTKAG KLFYERTGDL LMQYEALKHN LSDLKEEEAG IINIGVSEPT
110 120 130 140 150
ASLIFPEILK DFLMDYPKIT VNIKVDDANT CSQKLLDGTI DFAVCGEPEL
160 170 180 190 200
ILENYYHPFF YDTLNVIVSD QHPLAEKKAV HLSDLAEERF IFTPANCPIR
210 220 230 240 250
LQIEQHLHRE LGNRYKKMEL TSSMSHEYYV RENIGISIFT STAHSKPFNG
260 270 280 290 300
TKVIPILNLD ITPPIGLLTN QKEVHFDRAT KDLIARITKR FQQRSKELEG

TSDKTITG
Length:308
Mass (Da):35,233
Last modified:January 1, 1998 - v1
Checksum:iCF3773D9CAE34F56
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF008220 Genomic DNA. Translation: AAC00402.1.
AL009126 Genomic DNA. Translation: CAB14900.1.
PIRiE69995.
RefSeqiNP_390818.1. NC_000964.3.
WP_004398915.1. NZ_JNCM01000036.1.

Genome annotation databases

EnsemblBacteriaiCAB14900; CAB14900; BSU29400.
GeneIDi938452.
KEGGibsu:BSU29400.
PATRICi18977780. VBIBacSub10457_3078.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF008220 Genomic DNA. Translation: AAC00402.1.
AL009126 Genomic DNA. Translation: CAB14900.1.
PIRiE69995.
RefSeqiNP_390818.1. NC_000964.3.
WP_004398915.1. NZ_JNCM01000036.1.

3D structure databases

ProteinModelPortaliO35038.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100016046.

Proteomic databases

PaxDbiO35038.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB14900; CAB14900; BSU29400.
GeneIDi938452.
KEGGibsu:BSU29400.
PATRICi18977780. VBIBacSub10457_3078.

Phylogenomic databases

eggNOGiENOG4108KSA. Bacteria.
ENOG410XQIB. LUCA.
HOGENOMiHOG000009116.
InParanoidiO35038.
OMAiYRRKLEM.
PhylomeDBiO35038.

Enzyme and pathway databases

BioCyciBSUB:BSU29400-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYTLI_BACSU
AccessioniPrimary (citable) accession number: O35038
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: January 1, 1998
Last modified: October 5, 2016
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.