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Protein

Uncharacterized EAL-domain containing protein YkuI

Gene

ykuI

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU14090-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized EAL-domain containing protein YkuI
Gene namesi
Name:ykuI
Ordered Locus Names:BSU14090
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003599241 – 407Uncharacterized EAL-domain containing protein YkuIAdd BLAST407

Proteomic databases

PaxDbiO35014.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100007826.

Structurei

Secondary structure

1407
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi4 – 9Combined sources6
Turni10 – 13Combined sources4
Beta strandi14 – 40Combined sources27
Beta strandi43 – 47Combined sources5
Helixi48 – 51Combined sources4
Beta strandi54 – 56Combined sources3
Helixi58 – 76Combined sources19
Beta strandi84 – 88Combined sources5
Helixi91 – 94Combined sources4
Helixi95 – 97Combined sources3
Helixi100 – 111Combined sources12
Helixi116 – 118Combined sources3
Beta strandi119 – 123Combined sources5
Helixi125 – 127Combined sources3
Helixi132 – 143Combined sources12
Turni144 – 146Combined sources3
Beta strandi148 – 154Combined sources7
Turni155 – 157Combined sources3
Helixi161 – 167Combined sources7
Beta strandi170 – 175Combined sources6
Turni177 – 179Combined sources3
Helixi187 – 202Combined sources16
Beta strandi205 – 209Combined sources5
Helixi214 – 222Combined sources9
Beta strandi225 – 228Combined sources4
Turni231 – 233Combined sources3
Beta strandi237 – 239Combined sources3
Turni243 – 246Combined sources4
Helixi247 – 287Combined sources41
Helixi294 – 304Combined sources11
Helixi306 – 308Combined sources3
Beta strandi310 – 316Combined sources7
Beta strandi319 – 321Combined sources3
Beta strandi325 – 329Combined sources5
Beta strandi332 – 336Combined sources5
Helixi337 – 339Combined sources3
Helixi350 – 360Combined sources11
Turni372 – 374Combined sources3
Beta strandi376 – 385Combined sources10
Turni386 – 388Combined sources3
Beta strandi389 – 395Combined sources7
Helixi397 – 400Combined sources4
Beta strandi403 – 405Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2BASX-ray2.61A/B1-407[»]
2W27X-ray2.80A/B1-407[»]
ProteinModelPortaliO35014.
SMRiO35014.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO35014.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 250EALPROSITE-ProRule annotationAdd BLAST250

Sequence similaritiesi

Contains 1 EAL domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105EPM. Bacteria.
COG2200. LUCA.
HOGENOMiHOG000096090.
InParanoidiO35014.
OMAiTIAQQER.
PhylomeDBiO35014.

Family and domain databases

CDDicd01948. EAL. 1 hit.
Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR029151. Sensor-like.
IPR018842. YkuI_C.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF10388. YkuI_C. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
SSF141868. SSF141868. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O35014-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLDPLDILTN IDDVLPYYQA IFSAEEQKVV GYEVLGRILA DSEIQSLGPF
60 70 80 90 100
FLDAGIPEEY KLEVDNRIIR QALDRFLEAD SDLLIFMNQD ANLLMLDHGE
110 120 130 140 150
SFLELLKEYE AKGIELHRFV LEITEHNFEG DIEQLYHMLA YYRTYGIKIA
160 170 180 190 200
VDNIGKESSN LDRIALLSPD LLKIDLQALK VSQPSPSYEH VLYSISLLAR
210 220 230 240 250
KIGAALLYED IEANFQLQYA WRNGGRYFQG YYLVSPSETF LERDVLKQRL
260 270 280 290 300
KTEFHQFITH EKKKLETVYE HSEQFYKRVH QAVTSLRKNN LSSDDDFIKK
310 320 330 340 350
LAEELTDCSF RIYMCDEEGD QLTGNVFKQD GEWIYQPEYA EKNWSWRPYF
360 370 380 390 400
LENIMRMRNL RKGFFSDLYS DLETGEMIRT FSYPMDDQMY LFIDLPYSYL

YEQDGLI
Length:407
Mass (Da):47,957
Last modified:January 1, 1998 - v1
Checksum:i6477AC03CD0C9A4E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ222587 Genomic DNA. Translation: CAA10872.1.
AL009126 Genomic DNA. Translation: CAB13282.1.
PIRiF69865.
RefSeqiNP_389292.1. NC_000964.3.
WP_003232391.1. NZ_JNCM01000035.1.

Genome annotation databases

EnsemblBacteriaiCAB13282; CAB13282; BSU14090.
GeneIDi939207.
KEGGibsu:BSU14090.
PATRICi18974605. VBIBacSub10457_1494.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ222587 Genomic DNA. Translation: CAA10872.1.
AL009126 Genomic DNA. Translation: CAB13282.1.
PIRiF69865.
RefSeqiNP_389292.1. NC_000964.3.
WP_003232391.1. NZ_JNCM01000035.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2BASX-ray2.61A/B1-407[»]
2W27X-ray2.80A/B1-407[»]
ProteinModelPortaliO35014.
SMRiO35014.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100007826.

Proteomic databases

PaxDbiO35014.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB13282; CAB13282; BSU14090.
GeneIDi939207.
KEGGibsu:BSU14090.
PATRICi18974605. VBIBacSub10457_1494.

Phylogenomic databases

eggNOGiENOG4105EPM. Bacteria.
COG2200. LUCA.
HOGENOMiHOG000096090.
InParanoidiO35014.
OMAiTIAQQER.
PhylomeDBiO35014.

Enzyme and pathway databases

BioCyciBSUB:BSU14090-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO35014.

Family and domain databases

CDDicd01948. EAL. 1 hit.
Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR029151. Sensor-like.
IPR018842. YkuI_C.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF10388. YkuI_C. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
SSF141868. SSF141868. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYKUI_BACSU
AccessioniPrimary (citable) accession number: O35014
Secondary accession number(s): Q796K5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.