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Protein

Uncharacterized HTH-type transcriptional regulator MsmR

Gene

msmR

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi4 – 23H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding, Repressor
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU30260-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator MsmR
Gene namesi
Name:msmR
Ordered Locus Names:BSU30260
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003607071 – 344Uncharacterized HTH-type transcriptional regulator MsmRAdd BLAST344

Proteomic databases

PaxDbiO34829
PRIDEiO34829

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100016481

Structurei

3D structure databases

ProteinModelPortaliO34829
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 58HTH lacI-typePROSITE-ProRule annotationAdd BLAST57

Phylogenomic databases

eggNOGiCOG1609 LUCA
HOGENOMiHOG000220180
InParanoidiO34829
KOiK02529
OMAiQEIARHT
PhylomeDBiO34829

Family and domain databases

CDDicd01392 HTH_LacI, 1 hit
InterProiView protein in InterPro
IPR000843 HTH_LacI
IPR010982 Lambda_DNA-bd_dom_sf
IPR028082 Peripla_BP_I
PfamiView protein in Pfam
PF00356 LacI, 1 hit
SMARTiView protein in SMART
SM00354 HTH_LACI, 1 hit
SUPFAMiSSF47413 SSF47413, 1 hit
SSF53822 SSF53822, 1 hit
PROSITEiView protein in PROSITE
PS00356 HTH_LACI_1, 1 hit
PS50932 HTH_LACI_2, 1 hit

Sequencei

Sequence statusi: Complete.

O34829-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRIKDIALK AKVSSATVSR ILNEDESLSV AGETRQRVIN IAEELGYQTV
60 70 80 90 100
AKRRKSRGQK QRAQPLIGVL SCLSPDQERQ DPYFSSIRKG IEKECFEQEI
110 120 130 140 150
FITNSIHLGS FQEHIFRELD GVIVIGRVHD EAVKHISGRL EHAVFINHSP
160 170 180 190 200
DPQAYDSIGI DFESASRQAI DHLFDLGYKR LGYIGGQEKE HTLKDGQSIR
210 220 230 240 250
RTIEDKRLTA FLESAAPQPE HVLIGEYSMR EGYRLMKKAI DQGHLPEAFF
260 270 280 290 300
IASDSMAIGA LKALQEAGLQ VPRDTAIVSF NGIEEAEFAS TPLTTVKVYT
310 320 330 340
EEMGRTGVKL LLDRLNGRTL PQHVTLPTTL IVRQSCGCTA KEVT
Length:344
Mass (Da):38,399
Last modified:January 1, 1998 - v1
Checksum:i0C9C394F3FAAC5CE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF008220 Genomic DNA Translation: AAC00387.1
AL009126 Genomic DNA Translation: CAB15004.1
PIRiA69661
RefSeqiNP_390904.1, NC_000964.3
WP_004398480.1, NZ_JNCM01000036.1

Genome annotation databases

EnsemblBacteriaiCAB15004; CAB15004; BSU30260
GeneIDi937257
KEGGibsu:BSU30260
PATRICifig|224308.179.peg.3282

Similar proteinsi

Entry informationi

Entry nameiMSMR_BACSU
AccessioniPrimary (citable) accession number: O34829
Secondary accession number(s): Q795R0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

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