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Protein

Uncharacterized oxidoreductase YvrD

Gene

yvrD

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei141SubstrateBy similarity1
Active sitei154Proton acceptorPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi13 – 20NAD or NADPBy similarity8

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Enzyme and pathway databases

BioCyciBSUB:BSU33190-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized oxidoreductase YvrD (EC:1.-.-.-)
Gene namesi
Name:yvrD
Ordered Locus Names:BSU33190
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003770041 – 263Uncharacterized oxidoreductase YvrDAdd BLAST263

Proteomic databases

PaxDbiO34782.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100018016.

Structurei

3D structure databases

ProteinModelPortaliO34782.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105EWI. Bacteria.
ENOG410XRQC. LUCA.
InParanoidiO34782.
OMAiLMARSAN.
PhylomeDBiO34782.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O34782-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLQLKEKLV LITGSTSGIG KAAAKSFLQE GAAVIVNGRK QETVDRTIEE
60 70 80 90 100
LSGYGTVHGA AADLSKTDEA AAFIEKVNEI GDIDILVNNL GFFEVKDFAD
110 120 130 140 150
VTDEEWNQYF EVNVMSAVRT SRHFLPKMLA KNSGRILNIA SEAGVKPLPT
160 170 180 190 200
MIPYSMTKTA LISLSRGMAE MTKGTNVTVN SVLPGPTWTE GVASYMEGAA
210 220 230 240 250
QAAGQDTDTF IKDYFKVNEP TSLIQRYATA EEVANTIVFL ASDAASAING
260
TAQRVEGGII RSL
Length:263
Mass (Da):28,222
Last modified:January 1, 1998 - v1
Checksum:iF4220412BAF60808
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ223978 Genomic DNA. Translation: CAA11734.1.
AL009126 Genomic DNA. Translation: CAB15309.1.
PIRiH70046.
RefSeqiNP_391199.1. NC_000964.3.
WP_003242985.1. NZ_JNCM01000033.1.

Genome annotation databases

EnsemblBacteriaiCAB15309; CAB15309; BSU33190.
GeneIDi938584.
KEGGibsu:BSU33190.
PATRICi18978630. VBIBacSub10457_3478.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ223978 Genomic DNA. Translation: CAA11734.1.
AL009126 Genomic DNA. Translation: CAB15309.1.
PIRiH70046.
RefSeqiNP_391199.1. NC_000964.3.
WP_003242985.1. NZ_JNCM01000033.1.

3D structure databases

ProteinModelPortaliO34782.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100018016.

Proteomic databases

PaxDbiO34782.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB15309; CAB15309; BSU33190.
GeneIDi938584.
KEGGibsu:BSU33190.
PATRICi18978630. VBIBacSub10457_3478.

Phylogenomic databases

eggNOGiENOG4105EWI. Bacteria.
ENOG410XRQC. LUCA.
InParanoidiO34782.
OMAiLMARSAN.
PhylomeDBiO34782.

Enzyme and pathway databases

BioCyciBSUB:BSU33190-MONOMER.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYVRD_BACSU
AccessioniPrimary (citable) accession number: O34782
Secondary accession number(s): Q7B2K2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: January 1, 1998
Last modified: October 5, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.