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Protein

Oxalate decarboxylase OxdD

Gene

oxdD

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Converts oxalate to formate and CO2.

Catalytic activityi

Oxalate = formate + CO2.

Cofactori

Mn2+By similarityNote: Binds 2 manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi104Manganese 1By similarity1
Metal bindingi106Manganese 1By similarity1
Metal bindingi110Manganese 1By similarity1
Metal bindingi149Manganese 1By similarity1
Metal bindingi281Manganese 2By similarity1
Metal bindingi283Manganese 2By similarity1
Metal bindingi288Manganese 2By similarity1
Metal bindingi327Manganese 2By similarity1
Active sitei341Proton donorBy similarity1

GO - Molecular functioni

  • metal ion binding Source: UniProtKB-KW
  • nutrient reservoir activity Source: InterPro
  • oxalate decarboxylase activity Source: UniProtKB

GO - Biological processi

  • oxalate metabolic process Source: UniProtKB

Keywordsi

Molecular functionDecarboxylase, Lyase
LigandManganese, Metal-binding

Enzyme and pathway databases

BioCyciBSUB:BSU18670-MONOMER
BRENDAi4.1.1.2 658

Names & Taxonomyi

Protein namesi
Recommended name:
Oxalate decarboxylase OxdD (EC:4.1.1.2)
Gene namesi
Name:oxdD
Synonyms:yoaN
Ordered Locus Names:BSU18670
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000581071 – 392Oxalate decarboxylase OxdDAdd BLAST392

Proteomic databases

PaxDbiO34767
PRIDEiO34767

Interactioni

Protein-protein interaction databases

IntActiO34767, 1 interactor
STRINGi224308.Bsubs1_010100010291

Structurei

3D structure databases

ProteinModelPortaliO34767
SMRiO34767
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To B.subtilis OxdC.Curated

Phylogenomic databases

eggNOGiENOG4105F0F Bacteria
COG2140 LUCA
HOGENOMiHOG000200624
InParanoidiO34767
KOiK01569
OMAiHPNNDEW
PhylomeDBiO34767

Family and domain databases

Gene3Di2.60.120.10, 3 hits
InterProiView protein in InterPro
IPR017774 Bicupin_oxalate_deCO2ase/Oxase
IPR006045 Cupin_1
IPR014710 RmlC-like_jellyroll
IPR011051 RmlC_Cupin_sf
PfamiView protein in Pfam
PF00190 Cupin_1, 2 hits
SMARTiView protein in SMART
SM00835 Cupin_1, 2 hits
SUPFAMiSSF51182 SSF51182, 1 hit
TIGRFAMsiTIGR03404 bicupin_oxalic, 1 hit

Sequencei

Sequence statusi: Complete.

O34767-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLEQQPINH EDRNVPQPIR SDGAGAIDTG PRNIIRDIQN PNIFVPPVTD
60 70 80 90 100
EGMIPNLRFS FSDAPMKLDH GGWSREITVR QLPISTAIAG VNMSLTAGGV
110 120 130 140 150
RELHWHKQAE WAYMLLGRAR ITAVDQDGRN FIADVGPGDL WYFPAGIPHS
160 170 180 190 200
IQGLEHCEFL LVFDDGNFSE FSTLTISDWL AHTPKDVLSA NFGVPENAFN
210 220 230 240 250
SLPSEQVYIY QGNVPGSVAS EDIQSPYGKV PMTFKHELLN QPPIQMPGGS
260 270 280 290 300
VRIVDSSNFP ISKTIAAALV QIEPGAMREL HWHPNSDEWQ YYLTGQGRMT
310 320 330 340 350
VFIGNGTART FDYRAGDVGY VPSNAGHYIQ NTGTETLWFL EMFKSNRYAD
360 370 380 390
VSLNQWMALT PKELVQSNLN AGSVMLDSLR KKKVPVVKYP GT
Length:392
Mass (Da):43,554
Last modified:January 1, 1998 - v1
Checksum:i54642A8AD727DC30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF027868 Genomic DNA Translation: AAB84450.1
AL009126 Genomic DNA Translation: CAB13759.1
PIRiG69896
RefSeqiNP_389748.1, NC_000964.3
WP_003231409.1, NZ_JNCM01000036.1

Genome annotation databases

EnsemblBacteriaiCAB13759; CAB13759; BSU18670
GeneIDi940006
KEGGibsu:BSU18670
PATRICifig|224308.179.peg.2036

Similar proteinsi

Entry informationi

Entry nameiOXDD_BACSU
AccessioniPrimary (citable) accession number: O34767
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 6, 2002
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health