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Protein

Uncharacterized protein YdjO

Gene

ydjO

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU06270-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YdjO
Gene namesi
Name:ydjO
Ordered Locus Names:BSU06270
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570: Chromosome

Organism-specific databases

GenoListiBSU06270.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6969Uncharacterized protein YdjOPRO_0000375815Add
BLAST

Proteomic databases

PaxDbiO34759.

Interactioni

Protein-protein interaction databases

STRINGi224308.BSU06270.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG48079.
HOGENOMiHOG000002164.
OMAiGSKMIDG.
OrthoDBiEOG6N0HQ9.

Family and domain databases

InterProiIPR025916. YdjO.
[Graphical view]
PfamiPF14169. YdjO. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O34759-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSYYNKRNQE PLPKEDVSTW ECTKEDCNGW TRKNFASSDT PLCPLCGSKM
60
VDGIRSLVNL QNNSQTKTS
Length:69
Mass (Da):7,847
Last modified:January 1, 1998 - v1
Checksum:i922D060076E065FF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB007638 Genomic DNA. Translation: BAA22771.1.
AL009126 Genomic DNA. Translation: CAB12446.1.
PIRiC69790.
RefSeqiNP_388508.1. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB12446; CAB12446; BSU06270.
GeneIDi936021.
KEGGibsu:BSU06270.
PATRICi18972894. VBIBacSub10457_0661.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB007638 Genomic DNA. Translation: BAA22771.1.
AL009126 Genomic DNA. Translation: CAB12446.1.
PIRiC69790.
RefSeqiNP_388508.1. NC_000964.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.BSU06270.

Proteomic databases

PaxDbiO34759.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB12446; CAB12446; BSU06270.
GeneIDi936021.
KEGGibsu:BSU06270.
PATRICi18972894. VBIBacSub10457_0661.

Organism-specific databases

GenoListiBSU06270.

Phylogenomic databases

eggNOGiNOG48079.
HOGENOMiHOG000002164.
OMAiGSKMIDG.
OrthoDBiEOG6N0HQ9.

Enzyme and pathway databases

BioCyciBSUB:BSU06270-MONOMER.

Family and domain databases

InterProiIPR025916. YdjO.
[Graphical view]
PfamiPF14169. YdjO. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence analysis of the groESL-cotA region of the Bacillus subtilis genome, containing the restriction/modification system genes."
    Kasahara Y., Nakai S., Ogasawara N., Yata K., Sadaie Y.
    DNA Res. 4:335-339(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168 / Marburg / ATCC 6051 / DSM 10 / JCM 1465 / NBRC 13719 / NCIMB 3610 / VKM B-501.
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiYDJO_BACSU
AccessioniPrimary (citable) accession number: O34759
Secondary accession number(s): Q797C0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 26, 2009
Last sequence update: January 1, 1998
Last modified: January 7, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.