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Protein

Uncharacterized protein YfmB

Gene

yfmB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU07530-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfmB
Gene namesi
Name:yfmB
Ordered Locus Names:BSU07530
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000495381 – 122Uncharacterized protein YfmBAdd BLAST122

Proteomic databases

PaxDbiO34626.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100004213.

Structurei

Secondary structure

1122
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi6 – 26Combined sources21
Beta strandi27 – 29Combined sources3
Helixi33 – 42Combined sources10
Helixi48 – 56Combined sources9
Beta strandi65 – 67Combined sources3
Helixi68 – 80Combined sources13
Helixi81 – 83Combined sources3
Helixi86 – 99Combined sources14

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2EUCX-ray2.50A/B1-122[»]
ProteinModelPortaliO34626.
SMRiO34626.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO34626.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000008795.
OMAiFNAWVVS.

Family and domain databases

InterProiIPR021579. DUF3212.
[Graphical view]
PfamiPF11486. DUF3212. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O34626-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQYFSPEQQY NAWIVSDLVK QIFHKRAGCS PGIHELAVFA EEHFHIDIDF
60 70 80 90 100
VFSIIMNIGD IEFALTDEIE KKLSGYLSTL LPYVTADMFE TSKANAHAFL
110 120
SRRHGNAAYH LFVSDDAFMR KQ
Length:122
Mass (Da):14,034
Last modified:January 1, 1998 - v1
Checksum:i5CB2DFCCF8FEEA01
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D86417 Genomic DNA. Translation: BAA22316.1.
AL009126 Genomic DNA. Translation: CAB12582.1.
PIRiA69812.
RefSeqiNP_388634.1. NC_000964.3.
WP_003233730.1. NZ_JNCM01000032.1.

Genome annotation databases

EnsemblBacteriaiCAB12582; CAB12582; BSU07530.
GeneIDi938795.
KEGGibsu:BSU07530.
PATRICi18973158. VBIBacSub10457_0793.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D86417 Genomic DNA. Translation: BAA22316.1.
AL009126 Genomic DNA. Translation: CAB12582.1.
PIRiA69812.
RefSeqiNP_388634.1. NC_000964.3.
WP_003233730.1. NZ_JNCM01000032.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2EUCX-ray2.50A/B1-122[»]
ProteinModelPortaliO34626.
SMRiO34626.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100004213.

Proteomic databases

PaxDbiO34626.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB12582; CAB12582; BSU07530.
GeneIDi938795.
KEGGibsu:BSU07530.
PATRICi18973158. VBIBacSub10457_0793.

Phylogenomic databases

HOGENOMiHOG000008795.
OMAiFNAWVVS.

Enzyme and pathway databases

BioCyciBSUB:BSU07530-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO34626.

Family and domain databases

InterProiIPR021579. DUF3212.
[Graphical view]
PfamiPF11486. DUF3212. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYFMB_BACSU
AccessioniPrimary (citable) accession number: O34626
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 25, 2003
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.