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O34579

- YFKD_BACSU

UniProt

O34579 - YFKD_BACSU

Protein

Uncharacterized protein YfkD

Gene

yfkD

Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (01 Jan 1998)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciBSUB:BSU07930-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein YfkD
    Gene namesi
    Name:yfkD
    Ordered Locus Names:BSU07930
    OrganismiBacillus subtilis (strain 168)
    Taxonomic identifieri224308 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000001570: Chromosome

    Organism-specific databases

    GenoListiBSU07930.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2626Sequence AnalysisAdd
    BLAST
    Chaini27 – 264238Uncharacterized protein YfkDPRO_0000379096Add
    BLAST

    Proteomic databases

    PaxDbiO34579.

    Expressioni

    Inductioni

    Transcriptionally regulated by the forespore-specific sigma factor, SigG, and the general stress response regulator, SigB.1 Publication

    Interactioni

    Protein-protein interaction databases

    STRINGi224308.BSU07930.

    Structurei

    3D structure databases

    ProteinModelPortaliO34579.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiNOG11176.
    HOGENOMiHOG000083012.
    OMAiGAWIPVQ.
    OrthoDBiEOG6C2WCM.

    Family and domain databases

    InterProiIPR025548. YfkD.
    [Graphical view]
    PfamiPF14167. YfkD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    O34579-1 [UniParc]FASTAAdd to Basket

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    MMKKLFHSTL IVLLFFSFFG VQPIHAKKQF KVPNSVASIS KENTYPNASQ    50
    DQPMLQPSKL AKELLDHSEV KIENPHLIKM LNESNISGTP LAVGYRATIF 100
    LGKWALGYES NETVANWEYK KINTNRADNR GGKETAEMHY AQEQQYRVKG 150
    GLTAKVPNAE DVKSMMMQKA MKKTNLPLAF ETVIGAGTKR DQIYKVAPKK 200
    IGYLHAYAPA VNEKGKVTYG EVYLVLKGNK RKLVVKNVTS QGIGAWIPVQ 250
    DHVTFGFQLS SLPR 264
    Length:264
    Mass (Da):29,587
    Last modified:January 1, 1998 - v1
    Checksum:i69C8E3A10DC57D99
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D83967 Genomic DNA. Translation: BAA23394.1.
    AL009126 Genomic DNA. Translation: CAB12622.1.
    PIRiH69807.
    RefSeqiNP_388674.1. NC_000964.3.
    WP_003233657.1. NC_000964.3.

    Genome annotation databases

    EnsemblBacteriaiCAB12622; CAB12622; BSU07930.
    GeneIDi936138.
    KEGGibsu:BSU07930.
    PATRICi18973238. VBIBacSub10457_0833.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D83967 Genomic DNA. Translation: BAA23394.1 .
    AL009126 Genomic DNA. Translation: CAB12622.1 .
    PIRi H69807.
    RefSeqi NP_388674.1. NC_000964.3.
    WP_003233657.1. NC_000964.3.

    3D structure databases

    ProteinModelPortali O34579.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224308.BSU07930.

    Proteomic databases

    PaxDbi O34579.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAB12622 ; CAB12622 ; BSU07930 .
    GeneIDi 936138.
    KEGGi bsu:BSU07930.
    PATRICi 18973238. VBIBacSub10457_0833.

    Organism-specific databases

    GenoListi BSU07930.

    Phylogenomic databases

    eggNOGi NOG11176.
    HOGENOMi HOG000083012.
    OMAi GAWIPVQ.
    OrthoDBi EOG6C2WCM.

    Enzyme and pathway databases

    BioCyci BSUB:BSU07930-MONOMER.

    Family and domain databases

    InterProi IPR025548. YfkD.
    [Graphical view ]
    Pfami PF14167. YfkD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning and sequencing of a 40.6 kb segment in the 73 degrees-76 degrees region of the Bacillus subtilis chromosome containing genes for trehalose metabolism and acetoin utilization."
      Yamamoto H., Uchiyama S., Sekiguchi J.
      Microbiology 142:3057-3065(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: 168 / AC327.
    2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
      Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
      , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
      Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 168.
    3. "Characterization of Bacillus subtilis YfkE (ChaA): a calcium-specific Ca2+/H+ antiporter of the CaCA family."
      Fujisawa M., Wada Y., Tsuchiya T., Ito M.
      Arch. Microbiol. 191:649-657(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: INDUCTION.
      Strain: 168.

    Entry informationi

    Entry nameiYFKD_BACSU
    AccessioniPrimary (citable) accession number: O34579
    Secondary accession number(s): Q79EY3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 7, 2009
    Last sequence update: January 1, 1998
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Bacillus subtilis
      Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

    External Data

    Dasty 3