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Protein

Uncharacterized protein YlbL

Gene

ylbL

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei234PROSITE-ProRule annotation1
Active sitei279PROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protease, Serine protease

Enzyme and pathway databases

BioCyciBSUB:BSU15050-MONOMER.

Protein family/group databases

MEROPSiS16.A12.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YlbL
Gene namesi
Name:ylbL
Ordered Locus Names:BSU15050
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei9 – 29HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003601701 – 341Uncharacterized protein YlbLAdd BLAST341

Proteomic databases

PaxDbiO34470.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100008321.

Structurei

Secondary structure

1341
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi150 – 154Combined sources5
Helixi162 – 169Combined sources8
Beta strandi180 – 186Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2KJPNMR-A128-210[»]
ProteinModelPortaliO34470.
SMRiO34470.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO34470.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini100 – 186PDZPROSITE-ProRule annotationAdd BLAST87
Domaini187 – 336Lon proteolyticPROSITE-ProRule annotationAdd BLAST150

Sequence similaritiesi

Belongs to the peptidase S16 family.PROSITE-ProRule annotation
Contains 1 Lon proteolytic domain.PROSITE-ProRule annotation
Contains 1 PDZ (DHR) domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG41063PX. Bacteria.
COG3480. LUCA.
HOGENOMiHOG000050561.
InParanoidiO34470.
KOiK07177.
OMAiSDMKIVP.
PhylomeDBiO34470.

Family and domain databases

Gene3Di2.30.42.10. 1 hit.
3.30.230.10. 1 hit.
InterProiIPR027065. Lon_Prtase.
IPR001478. PDZ.
IPR008269. Pept_S16_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
[Graphical view]
PANTHERiPTHR10046. PTHR10046. 1 hit.
PfamiPF05362. Lon_C. 1 hit.
PF13180. PDZ_2. 1 hit.
[Graphical view]
SMARTiSM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMiSSF50156. SSF50156. 1 hit.
SSF54211. SSF54211. 1 hit.
PROSITEiPS51786. LON_PROTEOLYTIC. 1 hit.
PS50106. PDZ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O34470-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRKKHFSWM LVILILIAVL SFIKLPYYIT KPGEATELAS LIKVEGGYPE
60 70 80 90 100
KGSLSLMTVK VGPANPFTYV WAKMHPYYEI VPDESIKEEG ESDKEYMKRQ
110 120 130 140 150
LQMMKSSQEN AVIAAYQKAG KKVSYSFNGI YASSVVENMP AKGKIEVGDK
160 170 180 190 200
IISADGKNYQ SAEKLIDYIS SKKAGDKVTL KIEREEKEKR VTLTLKQFPD
210 220 230 240 250
EPDRAGIGVS LYTDRNVKVE PDIDFEIENI GGPSAGLMMS LEIYNQLTKP
260 270 280 290 300
DETKGYDIAG TGTIDVDGKV GPIGGIDQKV VAADKAGKDI FFAPNQNGAS
310 320 330 340
NSDYKNAVKT AKDIDSNMKI VPVDTMQDAI DYLNKLKAKS T
Length:341
Mass (Da):37,651
Last modified:June 16, 2009 - v2
Checksum:iF9BB69A370758213
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti340 – 341ST → QPDSQVLFLYI in CAB11358 (Ref. 1) Curated2

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z98682 Genomic DNA. Translation: CAB11358.1.
AL009126 Genomic DNA. Translation: CAB13378.2.
PIRiA69875.
RefSeqiNP_389388.2. NC_000964.3.
WP_003245451.1. NZ_JNCM01000035.1.

Genome annotation databases

EnsemblBacteriaiCAB13378; CAB13378; BSU15050.
GeneIDi936755.
KEGGibsu:BSU15050.
PATRICi18974811. VBIBacSub10457_1597.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z98682 Genomic DNA. Translation: CAB11358.1.
AL009126 Genomic DNA. Translation: CAB13378.2.
PIRiA69875.
RefSeqiNP_389388.2. NC_000964.3.
WP_003245451.1. NZ_JNCM01000035.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2KJPNMR-A128-210[»]
ProteinModelPortaliO34470.
SMRiO34470.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100008321.

Protein family/group databases

MEROPSiS16.A12.

Proteomic databases

PaxDbiO34470.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB13378; CAB13378; BSU15050.
GeneIDi936755.
KEGGibsu:BSU15050.
PATRICi18974811. VBIBacSub10457_1597.

Phylogenomic databases

eggNOGiENOG41063PX. Bacteria.
COG3480. LUCA.
HOGENOMiHOG000050561.
InParanoidiO34470.
KOiK07177.
OMAiSDMKIVP.
PhylomeDBiO34470.

Enzyme and pathway databases

BioCyciBSUB:BSU15050-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO34470.

Family and domain databases

Gene3Di2.30.42.10. 1 hit.
3.30.230.10. 1 hit.
InterProiIPR027065. Lon_Prtase.
IPR001478. PDZ.
IPR008269. Pept_S16_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
[Graphical view]
PANTHERiPTHR10046. PTHR10046. 1 hit.
PfamiPF05362. Lon_C. 1 hit.
PF13180. PDZ_2. 1 hit.
[Graphical view]
SMARTiSM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMiSSF50156. SSF50156. 1 hit.
SSF54211. SSF54211. 1 hit.
PROSITEiPS51786. LON_PROTEOLYTIC. 1 hit.
PS50106. PDZ. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYLBL_BACSU
AccessioniPrimary (citable) accession number: O34470
Secondary accession number(s): Q797T0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: June 16, 2009
Last modified: November 2, 2016
This is version 94 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Peptidase families
    Classification of peptidase families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.