Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized HTH-type transcriptional regulator YceK

Gene

yceK

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi44 – 67H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding, Repressor
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU02970-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YceK
Gene namesi
Name:yceK
Ordered Locus Names:BSU02970
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003599731 – 100Uncharacterized HTH-type transcriptional regulator YceKAdd BLAST100

Proteomic databases

PaxDbiO34464.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100001633.

Structurei

3D structure databases

ProteinModelPortaliO34464.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 100HTH arsR-typePROSITE-ProRule annotationAdd BLAST93

Phylogenomic databases

eggNOGiENOG4108A65. Bacteria.
COG0640. LUCA.
HOGENOMiHOG000144506.
InParanoidiO34464.
OMAiREMTCGE.
PhylomeDBiO34464.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR001845. HTH_ArsR_DNA-bd_dom.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF12840. HTH_20. 1 hit.
PRINTSiPR00778. HTHARSR.
SMARTiView protein in SMART
SM00418. HTH_ARSR. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS50987. HTH_ARSR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O34464-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYYSFMTMKQ SDDQIRAQIF KALSDESRLA IIRTLYVSGK ELSCGEVGEK
60 70 80 90 100
CNIVKTTASY HFKTLREAGL TATRKDSRTK YVSLREDTFQ TYLPGFLETL
Length:100
Mass (Da):11,493
Last modified:January 1, 1998 - v1
Checksum:i25C9477262FC5DA7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB000617 Genomic DNA. Translation: BAA22258.1.
AL009126 Genomic DNA. Translation: CAB12091.1.
PIRiE69757.
RefSeqiNP_388179.1. NC_000964.3.
WP_010886398.1. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB12091; CAB12091; BSU02970.
GeneIDi938357.
KEGGibsu:BSU02970.
PATRICi18972153. VBIBacSub10457_0305.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB000617 Genomic DNA. Translation: BAA22258.1.
AL009126 Genomic DNA. Translation: CAB12091.1.
PIRiE69757.
RefSeqiNP_388179.1. NC_000964.3.
WP_010886398.1. NC_000964.3.

3D structure databases

ProteinModelPortaliO34464.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100001633.

Proteomic databases

PaxDbiO34464.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB12091; CAB12091; BSU02970.
GeneIDi938357.
KEGGibsu:BSU02970.
PATRICi18972153. VBIBacSub10457_0305.

Phylogenomic databases

eggNOGiENOG4108A65. Bacteria.
COG0640. LUCA.
HOGENOMiHOG000144506.
InParanoidiO34464.
OMAiREMTCGE.
PhylomeDBiO34464.

Enzyme and pathway databases

BioCyciBSUB:BSU02970-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR001845. HTH_ArsR_DNA-bd_dom.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF12840. HTH_20. 1 hit.
PRINTSiPR00778. HTHARSR.
SMARTiView protein in SMART
SM00418. HTH_ARSR. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS50987. HTH_ARSR_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYCEK_BACSU
AccessioniPrimary (citable) accession number: O34464
Secondary accession number(s): Q797R1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: February 15, 2017
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.