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Protein

Putative cytochrome P450 YjiB

Gene

yjiB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Cofactori

hemeBy similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi349Iron (heme axial ligand)By similarity1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Monooxygenase, Oxidoreductase

Keywords - Ligandi

Heme, Iron, Metal-binding

Enzyme and pathway databases

BioCyciBSUB:BSU12210-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative cytochrome P450 YjiB (EC:1.14.-.-)
Gene namesi
Name:yjiB
Ordered Locus Names:BSU12210
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000522361 – 396Putative cytochrome P450 YjiBAdd BLAST396

Proteomic databases

PaxDbiO34374.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100006751.

Structurei

Secondary structure

1396
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi27 – 36Combined sources10
Beta strandi38 – 42Combined sources5
Turni43 – 46Combined sources4
Beta strandi47 – 50Combined sources4
Helixi53 – 61Combined sources9
Turni63 – 65Combined sources3
Helixi80 – 83Combined sources4
Helixi88 – 96Combined sources9
Helixi97 – 99Combined sources3
Helixi102 – 123Combined sources22
Beta strandi127 – 130Combined sources4
Helixi131 – 134Combined sources4
Turni135 – 137Combined sources3
Helixi138 – 147Combined sources10
Helixi152 – 154Combined sources3
Helixi155 – 165Combined sources11
Beta strandi173 – 175Combined sources3
Helixi177 – 204Combined sources28
Helixi210 – 215Combined sources6
Helixi226 – 257Combined sources32
Helixi261 – 267Combined sources7
Helixi269 – 271Combined sources3
Helixi272 – 282Combined sources11
Beta strandi289 – 295Combined sources7
Beta strandi297 – 299Combined sources3
Beta strandi302 – 304Combined sources3
Beta strandi309 – 312Combined sources4
Helixi314 – 317Combined sources4
Turni321 – 323Combined sources3
Beta strandi324 – 326Combined sources3
Helixi352 – 369Combined sources18
Beta strandi374 – 380Combined sources7
Beta strandi388 – 395Combined sources8

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4RM4X-ray1.77A1-396[»]
ProteinModelPortaliO34374.
SMRiO34374.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the cytochrome P450 family.Curated

Phylogenomic databases

eggNOGiENOG4106A3M. Bacteria.
COG2124. LUCA.
HOGENOMiHOG000243678.
InParanoidiO34374.
OMAiMECVSIT.
PhylomeDBiO34374.

Family and domain databases

Gene3Di1.10.630.10. 1 hit.
InterProiIPR001128. Cyt_P450.
IPR002397. Cyt_P450_B.
IPR017972. Cyt_P450_CS.
[Graphical view]
PfamiPF00067. p450. 1 hit.
[Graphical view]
PRINTSiPR00359. BP450.
PR00385. P450.
SUPFAMiSSF48264. SSF48264. 1 hit.
PROSITEiPS00086. CYTOCHROME_P450. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O34374-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVLNRRQAL QRALLNGKNK QDAYHPFPWY ESMRKDAPVS FDEENQVWSV
60 70 80 90 100
FLYDDVKKVV GDKELFSSCM PQQTSSIGNS IINMDPPKHT KIRSVVNKAF
110 120 130 140 150
TPRVMKQWEP RIQEITDELI QKFQGRSEFD LVHDFSYPLP VIVISELLGV
160 170 180 190 200
PSAHMEQFKA WSDLLVSTPK DKSEEAEKAF LEERDKCEEE LAAFFAGIIE
210 220 230 240 250
EKRNKPEQDI ISILVEAEET GEKLSGEELI PFCTLLLVAG NETTTNLISN
260 270 280 290 300
AMYSILETPG VYEELRSHPE LMPQAVEEAL RFRAPAPVLR RIAKRDTEIG
310 320 330 340 350
GHLIKEGDMV LAFVASANRD EAKFDRPHMF DIRRHPNPHI AFGHGIHFCL
360 370 380 390
GAPLARLEAN IALTSLISAF PHMECVSITP IENSVIYGLK SFRVKM
Length:396
Mass (Da):44,991
Last modified:January 1, 1998 - v1
Checksum:i9A89CF12613DBCFB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF015825 Genomic DNA. Translation: AAC46317.1.
AL009126 Genomic DNA. Translation: CAB13078.1.
PIRiB69851.
RefSeqiNP_389103.1. NC_000964.3.
WP_003232789.1. NZ_JNCM01000035.1.

Genome annotation databases

EnsemblBacteriaiCAB13078; CAB13078; BSU12210.
GeneIDi936452.
KEGGibsu:BSU12210.
PATRICi18974175. VBIBacSub10457_1280.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF015825 Genomic DNA. Translation: AAC46317.1.
AL009126 Genomic DNA. Translation: CAB13078.1.
PIRiB69851.
RefSeqiNP_389103.1. NC_000964.3.
WP_003232789.1. NZ_JNCM01000035.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4RM4X-ray1.77A1-396[»]
ProteinModelPortaliO34374.
SMRiO34374.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100006751.

Proteomic databases

PaxDbiO34374.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB13078; CAB13078; BSU12210.
GeneIDi936452.
KEGGibsu:BSU12210.
PATRICi18974175. VBIBacSub10457_1280.

Phylogenomic databases

eggNOGiENOG4106A3M. Bacteria.
COG2124. LUCA.
HOGENOMiHOG000243678.
InParanoidiO34374.
OMAiMECVSIT.
PhylomeDBiO34374.

Enzyme and pathway databases

BioCyciBSUB:BSU12210-MONOMER.

Family and domain databases

Gene3Di1.10.630.10. 1 hit.
InterProiIPR001128. Cyt_P450.
IPR002397. Cyt_P450_B.
IPR017972. Cyt_P450_CS.
[Graphical view]
PfamiPF00067. p450. 1 hit.
[Graphical view]
PRINTSiPR00359. BP450.
PR00385. P450.
SUPFAMiSSF48264. SSF48264. 1 hit.
PROSITEiPS00086. CYTOCHROME_P450. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYJIB_BACSU
AccessioniPrimary (citable) accession number: O34374
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.