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Protein

Putative L-amino-acid oxidase YobN

Gene

yobN

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

An L-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2.

Cofactori

FADBy similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei34 – 341FADBy similarity
Binding sitei53 – 531FADBy similarity
Binding sitei61 – 611FADBy similarity
Binding sitei81 – 811SubstrateBy similarity
Binding sitei369 – 3691SubstrateBy similarity
Binding sitei451 – 4511FADBy similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi80 – 812FADBy similarity
Nucleotide bindingi460 – 4634FADBy similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

FAD, Flavoprotein

Enzyme and pathway databases

BioCyciBSUB:BSU19020-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative L-amino-acid oxidase YobN (EC:1.4.3.2)
Gene namesi
Name:yobN
Ordered Locus Names:BSU19020
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570 Componenti: Chromosome

Organism-specific databases

GenoListiBSU19020.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 478478Putative L-amino-acid oxidase YobNPRO_0000359955Add
BLAST

Proteomic databases

PaxDbiO34363.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100010506.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1231.
HOGENOMiHOG000088141.
InParanoidiO34363.
OMAiMEEMIHI.
OrthoDBiEOG6QVRCB.

Family and domain databases

InterProiIPR002937. Amino_oxidase.
IPR001613. Flavin_amine_oxidase.
[Graphical view]
PfamiPF01593. Amino_oxidase. 1 hit.
[Graphical view]
PRINTSiPR00757. AMINEOXDASEF.

Sequencei

Sequence statusi: Complete.

O34363-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSLMNDDMV KIIRNGLSAS QHPKHILVIG AGLSGLVSAS LLKNAGHRVT
60 70 80 90 100
ILEASGRAGG RVCTLRSPFS DDLYFNAGPM RIPNNHSLTL EYIKKFKLPT
110 120 130 140 150
NVFINRTPMD IIYANGIKTR LQVFERAPGI LRYPVAPNEQ GKTSEELMLS
160 170 180 190 200
LLQPILNFIN QNPARNWRIV EEQYKNHSLS SFLNTYFSYG AIDMIGVLLD
210 220 230 240 250
MEAYMGMSLV EVLRESIFFS SPAHFYEITG GMDLLPHAFL PQLKTNILYH
260 270 280 290 300
QKMMKMSQGE NRVTIHCQHQ QTAEFTSFTA DLAIVTIPFS TLRFVKVEPY
310 320 330 340 350
HSFSYYKRRA IRELNYISAT KIGIEFKSRF WEKAGQHGGK SITDLPIRFS
360 370 380 390 400
YYPSRNIGAN GHAVILASYT WADEALIWDS LSEGERIQYT LLNLSEIYGD
410 420 430 440 450
IVWSEFVSGT SFSWSQYPYS AGGFTAFEPG QELELYPYIP VPEGRVHFAG
460 470
EHASLTHAWM QGAIESGIRV AYEVNRLP
Length:478
Mass (Da):54,055
Last modified:July 24, 2013 - v3
Checksum:i29131507CD3F7DC9
GO

Sequence cautioni

The sequence AAB84430.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF027868 Genomic DNA. Translation: AAB84430.1. Different initiation.
AL009126 Genomic DNA. Translation: CAB13794.2.
PIRiE69899.
RefSeqiWP_010886528.1. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB13794; CAB13794; BSU19020.
PATRICi18975649. VBIBacSub10457_2015.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF027868 Genomic DNA. Translation: AAB84430.1. Different initiation.
AL009126 Genomic DNA. Translation: CAB13794.2.
PIRiE69899.
RefSeqiWP_010886528.1. NC_000964.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100010506.

Proteomic databases

PaxDbiO34363.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB13794; CAB13794; BSU19020.
PATRICi18975649. VBIBacSub10457_2015.

Organism-specific databases

GenoListiBSU19020.

Phylogenomic databases

eggNOGiCOG1231.
HOGENOMiHOG000088141.
InParanoidiO34363.
OMAiMEEMIHI.
OrthoDBiEOG6QVRCB.

Enzyme and pathway databases

BioCyciBSUB:BSU19020-MONOMER.

Family and domain databases

InterProiIPR002937. Amino_oxidase.
IPR001613. Flavin_amine_oxidase.
[Graphical view]
PfamiPF01593. Amino_oxidase. 1 hit.
[Graphical view]
PRINTSiPR00757. AMINEOXDASEF.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence analysis of the Bacillus subtilis chromosome region between the terC and odhAB loci cloned in a yeast artificial chromosome."
    Lapidus A., Galleron N., Sorokin A., Ehrlich S.D.
    Submitted (OCT-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiYOBN_BACSU
AccessioniPrimary (citable) accession number: O34363
Secondary accession number(s): Q796E0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: July 24, 2013
Last modified: June 24, 2015
This is version 88 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.