Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

O34111 (O34111_HELPX) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:vacA EMBL AAC77452.1
OrganismHelicobacter pylori (Campylobacter pylori) EMBL AAC77452.1
Taxonomic identifier210 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Protein attributes

Sequence length1290 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Biological_processpathogenesis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentextracellular region

Inferred from electronic annotation. Source: InterPro

outer membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
O34111 [UniParc].

Last modified May 1, 1999. Version 2.
Checksum: CDA478D88AF30E67

FASTA1,290139,322
        10         20         30         40         50         60 
MEIQQTHRKI NRPLVSLALV GALVSITPQQ SHAAFFTTVI IPAIVGGIAT GTAVGTVSGL 

        70         80         90        100        110        120 
LSWGLKQAEE ANKTPDKPDK VWRIQAGKGF NEFPNKEYDL YRSLLSSKID GGWDWGNAAR 

       130        140        150        160        170        180 
HYWVKGGQQN KLEVDMKDAV GTYKLSGLRN FTGGDLDVNM QKATLRLGQF NGNSFTSYKD 

       190        200        210        220        230        240 
SADRTTRVNF NAKNISIDNF LEINNRVGSG AGRKASSTVL TLQASEGITS GKNAEISLYD 

       250        260        270        280        290        300 
GATLNLASNS VKLMGNVLMG RLQYVGAYLA PSYSTINTSK VVGEVNFNHL TVGDRNAAQA 

       310        320        330        340        350        360 
GIIASKKTYI GTLDLWQSAG LNIIAPPEGG YKDKPNNTNS QSVGKSDKNE SAKNDKQDSN 

       370        380        390        400        410        420 
TQVINPPNSG QKTEIQPTQV IDGPFAGAKD TVVNINRINT NADGTIRVGG YTASLTTNAA 

       430        440        450        460        470        480 
HLHIGKGGVN LSNQASGRSL LVENLTGNIT VDGPLRVNNQ VGGYALAGSS ANFEFKAGTD 

       490        500        510        520        530        540 
TKNGTATFNN DISLRRFVNL KVDAHTANFK GIDTGNGGFN TLDFSGVTGK VNINKLITAS 

       550        560        570        580        590        600 
TNVAVKNFNI NELIVKTNGV SVGEYTHFSE DIGSQSRINT VRLETGTRSI YSGGVKFKGG 

       610        620        630        640        650        660 
EKLVINDFYY APWNYFDARN IKNVEITNKL AFGPQGSPWG TSKLMFNNLT LGPNAVMDYS 

       670        680        690        700        710        720 
QFSNVTIQGN FINNQGTINY LVRGGKVATL NVGNAAAMMF NNDIDSATGF YKPLIKINSA 

       730        740        750        760        770        780 
QDLIKNTEHV LLKAKIIGYG NVSTGTNGIS NVNLEEQFKE RLALYNNNNR MDTCVVRNTD 

       790        800        810        820        830        840 
DIKACGMAIG NQSMVNNPDN YKYLIGKAWR NIGISKTANG SKISVYYLGN STPTENGGNT 

       850        860        870        880        890        900 
TNLPTNTTNN ARSANYALVK NAPFAHSATP NLVAINQHDF GTIESVFELA NRSKDIDTLY 

       910        920        930        940        950        960 
THSGAQGRDL LQTLLIDSHD AGYARQMIDN TSTGEITKQL NAATDALNNI ASLEHKTSGL 

       970        980        990       1000       1010       1020 
QTLSLSNAMI LNSRLVNLSR RHTNNIDSFA RRLQALKDQR FASLESAAEV LYQFAPKYEK 

      1030       1040       1050       1060       1070       1080 
PTNVWANAIG GASLNSGGNT SLYGTSAGVD AYLNEKVEAI VGGFGSYGYS SFNNQANSLN 

      1090       1100       1110       1120       1130       1140 
SGANNANFGV YSRIFANRHE FDFEAQGAVG SDQSSLNFKS ALLQDLNQSY NYLAYSAATR 

      1150       1160       1170       1180       1190       1200 
ASYGYDFAFF RNALVLKPSV GVSYNHLGST NFESNSTNKT ALKNGASSQH LFNASANVEA 

      1210       1220       1230       1240       1250       1260 
RYYYGDTSYF YMNAGVLQEF ANFGSSNAVS LNTFKVNAAR NPLNTHARVM MGGELKLAKE 

      1270       1280       1290 
VFLNLGFVYL HNLISNIGHF ASNLGMRYSF 

« Hide

References

[1]"Analysis and typing of the vacA gene from cagA-positive strains of Helicobacter pylori isolated in Japan."
Ito Y., Azuma T., Ito S., Miyaji H., Hirai M., Yamazaki Y., Sato F., Kato T., Kohli Y., Kuriyama M.
J. Clin. Microbiol. 35:1710-1714(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: F79 EMBL AAC77452.1.
[2]"Full-length sequence analysis of the vacA gene from cytotoxic and noncytotoxic Helicobacter pylori."
Ito Y., Azuma T., Ito S., Suto H., Miyaji H., Yamazaki Y., Kohli Y., Kuriyama M.
J. Infect. Dis. 178:1391-1398(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: F79 EMBL AAC77452.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF071097 Genomic DNA. Translation: AAC77452.1.

3D structure databases

ProteinModelPortalO34111.
SMRO34111. Positions 391-847.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.40.128.130. 1 hit.
InterProIPR005546. Auto_transptbeta.
IPR006315. OM_autotransptr_brl.
IPR003842. Vacuolating_cytotoxin.
[Graphical view]
PfamPF02691. VacA. 1 hit.
[Graphical view]
PRINTSPR01656. VACCYTOTOXIN.
SMARTSM00869. Autotransporter. 1 hit.
[Graphical view]
SUPFAMSSF103515. SSF103515. 1 hit.
TIGRFAMsTIGR01414. autotrans_barl. 1 hit.
PROSITEPS51208. AUTOTRANSPORTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO34111_HELPX
AccessionPrimary (citable) accession number: O34111
Entry history
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: May 1, 1999
Last modified: April 16, 2014
This is version 43 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)