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Protein

Probable cat1 operon transcriptional activator

Gene
N/A
Organism
Acinetobacter lwoffii
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probable positive regulator of the cat1 operon which encode enzymes responsible for the degradation of catechol to acetyl-CoA via the beta-ketoadipate pathway.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi18 – 37H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Aromatic hydrocarbons catabolism, Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable cat1 operon transcriptional activator
Alternative name(s):
ORFR1
OrganismiAcinetobacter lwoffii
Taxonomic identifieri28090 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaeAcinetobacter

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001056001 – 303Probable cat1 operon transcriptional activatorAdd BLAST303

Structurei

3D structure databases

ProteinModelPortaliO33945.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 58HTH lysR-typePROSITE-ProRule annotationAdd BLAST58

Sequence similaritiesi

Contains 1 HTH lysR-type DNA-binding domain.PROSITE-ProRule annotation

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O33945-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLRQFRYFV AVARERNFTR AARQLNIAQP PLSRQIQLLE EEVGVPLLIR
60 70 80 90 100
NSRPVQLTDA GRLFFEQAIQ VLGRVEQMQA ATRRVGLHQR SVLSIGFVAS
110 120 130 140 150
TLYGVLPTLM RKLRQHAPEL DIQMVELMSV QQIQAINEGR IDIGFGRVHH
160 170 180 190 200
SDPNVSSIVL HEERLAVALP MESPMAREST PLPVHQLAGE KLIVYPKEPR
210 220 230 240 250
PGFADQVLNI LDRHDVQPGQ VMEVREIQTA LGLVAAEFGV CVIPASARQM
260 270 280 290 300
RHDVHYRLID GDRATSPVIV SHRANDSSKY ISLTKQLIRE MYAEHPAWLD

THN
Length:303
Mass (Da):34,267
Last modified:January 1, 1998 - v1
Checksum:iD0F7ABAA996D646F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U77658 Genomic DNA. Translation: AAC46229.1.
PIRiJC5946.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U77658 Genomic DNA. Translation: AAC46229.1.
PIRiJC5946.

3D structure databases

ProteinModelPortaliO33945.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCATR_ACILW
AccessioniPrimary (citable) accession number: O33945
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1999
Last sequence update: January 1, 1998
Last modified: December 9, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.