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Protein
Submitted name:

Cold shock protein CspD

Gene

cspB

Organism
Staphylococcus aureus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cold shock protein CspDImported
Submitted name:
Cold-shock proteinImported
Submitted name:
CspBImported
Gene namesi
Name:cspBImported
Synonyms:cspCImported
ORF Names:BN1321_430081Imported, BN1326_150230Imported, HMPREF3211_01006Imported
OrganismiStaphylococcus aureusImported
Taxonomic identifieri1280 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi
  • UP000042520 Componenti: Unassembled WGS sequence
  • UP000070177 Componenti: Unassembled WGS sequence
  • UP000039437 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi93062.SACOL2731.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini3 – 6664CSPInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 CSD (cold-shock) domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
KOiK03704.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O33591-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNGTVKWFN AEKGFGFIEQ ENGGDVFVHF SGIASDGYKT LEEGQKVTFE
60
ITEGQRGDQA VNVQTV
Length:66
Mass (Da):7,258
Last modified:January 1, 1998 - v1
Checksum:i8AB2BF8C252C1AC7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF003592 Genomic DNA. Translation: AAB61743.1.
CVOP01000007 Genomic DNA. Translation: CRI07641.1.
CVOU01000007 Genomic DNA. Translation: CRI18716.1.
CVOQ01000038 Genomic DNA. Translation: CRI20097.1.
LRQH01000088 Genomic DNA. Translation: KXA37233.1.
PIRiG90079.
RefSeqiWP_001059079.1. NZ_LT009690.1.

Genome annotation databases

EnsemblBacteriaiAIL59189; AIL59189; CH51_14405.
AKJ50448; AKJ50448; AA961_13785.
AKK59813; AKK59813; EP54_14065.
AKK62379; AKK62379; EQ90_13610.
CEF82106; CEF82106; SAU060112_40539.
KLL97804; KLL97804; RK64_00625.
KLM02561; KLM02561; RK60_13805.
KLM03451; KLM03451; RK61_03725.
KLM06017; KLM06017; RK66_11585.
KLM08612; KLM08612; RK70_10090.
KLM13509; KLM13509; RK65_03810.
KLM15971; KLM15971; RK75_04245.
KLM18580; KLM18580; RK73_11260.
KLM20113; KLM20113; RK68_04810.
KLM23425; KLM23425; RK77_07100.
KLM25812; KLM25812; RK79_02390.
KLM29013; KLM29013; RK63_04855.
KLM32063; KLM32063; RK74_06575.
KLM33752; KLM33752; RK69_12245.
KLM34700; KLM34700; RK78_02950.
KLM37670; KLM37670; RK72_04550.
KLM40836; KLM40836; RK67_04265.
KLM45220; KLM45220; RK76_06555.
KLM48079; KLM48079; RK62_06720.
KLM50230; KLM50230; RK80_04585.
KLM53284; KLM53284; RK85_05165.
KLM57135; KLM57135; RK86_06875.
KLM58759; KLM58759; RK71_04855.
KLM61182; KLM61182; RK83_02700.
KLM66176; KLM66176; RK82_11145.
KLM68535; KLM68535; RK81_11170.
KLM70815; KLM70815; RK89_06850.
KLM72741; KLM72741; RK84_05600.
KLM74455; KLM74455; RK91_03905.
KLM78875; KLM78875; RK92_09815.
KLM81468; KLM81468; RK87_09120.
KLM84779; KLM84779; RK90_11780.
KLM87460; KLM87460; RK88_11465.
KLM89237; KLM89237; RK98_06180.
KLM91883; KLM91883; RK94_11525.
KLM94183; KLM94183; RK99_05280.
KLM99251; KLM99251; RK95_07020.
KLN02176; KLN02176; RL04_03925.
KLN06257; KLN06257; RK96_07320.
KLN09260; KLN09260; RL06_06730.
KLN11574; KLN11574; RL02_03920.
KLN15964; KLN15964; RL01_10845.
KLN18480; KLN18480; RL08_08245.
KLN21640; KLN21640; RK93_08325.
KLN25037; KLN25037; RL00_10785.
KLN26240; KLN26240; RL03_02395.
KLN27527; KLN27527; RL07_12890.
KLN29448; KLN29448; RL05_07395.
KMY69449; KMY69449; TM61_11815.
KMY69507; KMY69507; TM58_12055.
KMY69561; KMY69561; TM59_12370.
KMY76711; KMY76711; TM60_13055.
KOQ00987; KOQ00987; ABW30_13640.
KOQ01085; KOQ01085; ABW29_13560.
KOQ06744; KOQ06744; ABW28_05455.
KOQ08617; KOQ08617; ABW31_13610.
KOQ09378; KOQ09378; ABW32_13660.
KOQ15595; KOQ15595; ABW33_08590.
KOS66122; KOS66122; AN169_00545.
KQB71675; KQB71675; AL077_02415.
KQB73019; KQB73019; AL078_04710.
KEGGisaud:CH52_05495.
sauf:X998_2691.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF003592 Genomic DNA. Translation: AAB61743.1.
CVOP01000007 Genomic DNA. Translation: CRI07641.1.
CVOU01000007 Genomic DNA. Translation: CRI18716.1.
CVOQ01000038 Genomic DNA. Translation: CRI20097.1.
LRQH01000088 Genomic DNA. Translation: KXA37233.1.
PIRiG90079.
RefSeqiWP_001059079.1. NZ_LT009690.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi93062.SACOL2731.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIL59189; AIL59189; CH51_14405.
AKJ50448; AKJ50448; AA961_13785.
AKK59813; AKK59813; EP54_14065.
AKK62379; AKK62379; EQ90_13610.
CEF82106; CEF82106; SAU060112_40539.
KLL97804; KLL97804; RK64_00625.
KLM02561; KLM02561; RK60_13805.
KLM03451; KLM03451; RK61_03725.
KLM06017; KLM06017; RK66_11585.
KLM08612; KLM08612; RK70_10090.
KLM13509; KLM13509; RK65_03810.
KLM15971; KLM15971; RK75_04245.
KLM18580; KLM18580; RK73_11260.
KLM20113; KLM20113; RK68_04810.
KLM23425; KLM23425; RK77_07100.
KLM25812; KLM25812; RK79_02390.
KLM29013; KLM29013; RK63_04855.
KLM32063; KLM32063; RK74_06575.
KLM33752; KLM33752; RK69_12245.
KLM34700; KLM34700; RK78_02950.
KLM37670; KLM37670; RK72_04550.
KLM40836; KLM40836; RK67_04265.
KLM45220; KLM45220; RK76_06555.
KLM48079; KLM48079; RK62_06720.
KLM50230; KLM50230; RK80_04585.
KLM53284; KLM53284; RK85_05165.
KLM57135; KLM57135; RK86_06875.
KLM58759; KLM58759; RK71_04855.
KLM61182; KLM61182; RK83_02700.
KLM66176; KLM66176; RK82_11145.
KLM68535; KLM68535; RK81_11170.
KLM70815; KLM70815; RK89_06850.
KLM72741; KLM72741; RK84_05600.
KLM74455; KLM74455; RK91_03905.
KLM78875; KLM78875; RK92_09815.
KLM81468; KLM81468; RK87_09120.
KLM84779; KLM84779; RK90_11780.
KLM87460; KLM87460; RK88_11465.
KLM89237; KLM89237; RK98_06180.
KLM91883; KLM91883; RK94_11525.
KLM94183; KLM94183; RK99_05280.
KLM99251; KLM99251; RK95_07020.
KLN02176; KLN02176; RL04_03925.
KLN06257; KLN06257; RK96_07320.
KLN09260; KLN09260; RL06_06730.
KLN11574; KLN11574; RL02_03920.
KLN15964; KLN15964; RL01_10845.
KLN18480; KLN18480; RL08_08245.
KLN21640; KLN21640; RK93_08325.
KLN25037; KLN25037; RL00_10785.
KLN26240; KLN26240; RL03_02395.
KLN27527; KLN27527; RL07_12890.
KLN29448; KLN29448; RL05_07395.
KMY69449; KMY69449; TM61_11815.
KMY69507; KMY69507; TM58_12055.
KMY69561; KMY69561; TM59_12370.
KMY76711; KMY76711; TM60_13055.
KOQ00987; KOQ00987; ABW30_13640.
KOQ01085; KOQ01085; ABW29_13560.
KOQ06744; KOQ06744; ABW28_05455.
KOQ08617; KOQ08617; ABW31_13610.
KOQ09378; KOQ09378; ABW32_13660.
KOQ15595; KOQ15595; ABW33_08590.
KOS66122; KOS66122; AN169_00545.
KQB71675; KQB71675; AL077_02415.
KQB73019; KQB73019; AL078_04710.
KEGGisaud:CH52_05495.
sauf:X998_2691.

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
KOiK03704.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO33591_STAAU
AccessioniPrimary (citable) accession number: O33591
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: September 7, 2016
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.