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Protein
Submitted name:

Cold shock protein CspD

Gene

cspB

Organism
Staphylococcus aureus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cold shock protein CspDImported
Submitted name:
Cold-shock proteinImported
Submitted name:
CspBImported
Gene namesi
Name:cspBImported
Synonyms:cspCImported
ORF Names:A4U86_13420Imported, A7J36_14895Imported, BN1321_430081Imported, BN1326_150230Imported, HMPREF3211_01006Imported
OrganismiStaphylococcus aureusImported
Taxonomic identifieri1280 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi
  • UP000077578 Componenti: Unassembled WGS sequence
  • UP000042520 Componenti: Unassembled WGS sequence
  • UP000070177 Componenti: Unassembled WGS sequence
  • UP000039437 Componenti: Unassembled WGS sequence
  • UP000078523 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi93062.SACOL2731.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 66CSPInterPro annotationAdd BLAST64

Sequence similaritiesi

Contains 1 CSD (cold-shock) domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
KOiK03704.

Family and domain databases

CDDicd04458. CSP_CDS. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O33591-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNGTVKWFN AEKGFGFIEQ ENGGDVFVHF SGIASDGYKT LEEGQKVTFE
60
ITEGQRGDQA VNVQTV
Length:66
Mass (Da):7,258
Last modified:January 1, 1998 - v1
Checksum:i8AB2BF8C252C1AC7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF003592 Genomic DNA. Translation: AAB61743.1.
CVOP01000007 Genomic DNA. Translation: CRI07641.1.
CVOU01000007 Genomic DNA. Translation: CRI18716.1.
CVOQ01000038 Genomic DNA. Translation: CRI20097.1.
LRQH01000088 Genomic DNA. Translation: KXA37233.1.
LXNN01000164 Genomic DNA. Translation: OAF72563.1.
LWAL01000021 Genomic DNA. Translation: OAP78500.1.
PIRiG90079.
RefSeqiWP_001059079.1. NZ_MCFM01000001.1.

Genome annotation databases

EnsemblBacteriaiAIL59189; AIL59189; CH51_14405.
CRI07641; CRI07641; BN1326_150230.
CRI20097; CRI20097; BN1321_430081.
KLN11574; KLN11574; RL02_03920.
KMY69449; KMY69449; TM61_11815.
KOS66122; KOS66122; AN169_00545.
KQB71675; KQB71675; AL077_02415.
KQB73019; KQB73019; AL078_04710.
GeneIDi28379648.
KEGGisaud:CH52_05495.
sauf:X998_2691.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF003592 Genomic DNA. Translation: AAB61743.1.
CVOP01000007 Genomic DNA. Translation: CRI07641.1.
CVOU01000007 Genomic DNA. Translation: CRI18716.1.
CVOQ01000038 Genomic DNA. Translation: CRI20097.1.
LRQH01000088 Genomic DNA. Translation: KXA37233.1.
LXNN01000164 Genomic DNA. Translation: OAF72563.1.
LWAL01000021 Genomic DNA. Translation: OAP78500.1.
PIRiG90079.
RefSeqiWP_001059079.1. NZ_MCFM01000001.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi93062.SACOL2731.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIL59189; AIL59189; CH51_14405.
CRI07641; CRI07641; BN1326_150230.
CRI20097; CRI20097; BN1321_430081.
KLN11574; KLN11574; RL02_03920.
KMY69449; KMY69449; TM61_11815.
KOS66122; KOS66122; AN169_00545.
KQB71675; KQB71675; AL077_02415.
KQB73019; KQB73019; AL078_04710.
GeneIDi28379648.
KEGGisaud:CH52_05495.
sauf:X998_2691.

Phylogenomic databases

eggNOGiENOG4105VEQ. Bacteria.
COG1278. LUCA.
KOiK03704.

Family and domain databases

CDDicd04458. CSP_CDS. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO33591_STAAU
AccessioniPrimary (citable) accession number: O33591
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.