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Protein
Submitted name:

Alpha-amylase

Gene

ApkA

Organism
Pyrococcus sp.
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BRENDAi3.2.1.1. 5027.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:ApkAImported
OrganismiPyrococcus sp.Imported
Taxonomic identifieri33866 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus

Structurei

3D structure databases

ProteinModelPortaliO33476.
SMRiO33476. Positions 27-461.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini36 – 381346AamyInterPro annotationAdd
BLAST

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

O33476-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKFVALLIT MFFVVSMAAV AQPASAAKYS ELEEGGVIMQ AFYWDVPAGG
60 70 80 90 100
IWWDTIRSKI PEWYEAGISA IWIPPASKGM GGAYSMGYDP YDFFDLGEYN
110 120 130 140 150
QKGTVETRFG SKQELINMIN TAHAYGIKVI ADIVINHRAG GDLEWNPFVG
160 170 180 190 200
DYTWTDFSKV ASGKYTANYL DFHPNEVKCC DEGTFGGFPD IAHEKEWDQH
210 220 230 240 250
WLWASDESYA AYLRSIGVDA WRFDYVKGYG AWVVKDWLNW WGGWAVGEYW
260 270 280 290 300
DTNVDALLNW AYSSGAKVFD FPLYYKMDEA FDNTNIPALV DALQNGGTVV
310 320 330 340 350
SRDPFKAVTF VANHDTDIIW NKYPAYAFIL TYEGQPVIFY RDYEEWLNKD
360 370 380 390 400
KLNNLIWIHD HLAGGSTSIV YYDSDELIFV RNGDSKRPGL ITYINLGSSK
410 420 430 440 450
VGRWVYVPKF AGACIHEYTG NLGGWVDKYV ESSGWVYLEA PAYDPASGQY
460
GYTVWSYCGV G
Length:461
Mass (Da):52,214
Last modified:January 1, 1998 - v1
Checksum:iFCC131A93DC03123
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D83793 Genomic DNA. Translation: BAA21130.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D83793 Genomic DNA. Translation: BAA21130.1.

3D structure databases

ProteinModelPortaliO33476.
SMRiO33476. Positions 27-461.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BRENDAi3.2.1.1. 5027.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Cloning and expression of the alpha-amylase gene from the hyperthermophilic archaeon Pyrococcus sp. KOD1, and characterization of the enzyme."
    Tachibana Y., Mendez L., Fujiwara S., Takagi M., Imanaka T.
    J. Ferment. Bioeng. 82:224-232(1996)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KOD1Imported.

Entry informationi

Entry nameiO33476_9EURY
AccessioniPrimary (citable) accession number: O33476
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: June 8, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.