O33476 (O33476_9EURY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-amylase EMBL BAA21130.1

Gene names

Name:

ApkA EMBL BAA21130.1

Organism

Pyrococcus sp. EMBL BAA21130.1

Taxonomic identifier

33866 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length	461 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL BAA21130.1
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 26	26	Potential EMBL BAA21130.1
	Chain	27 – 461	435	alpha-amylase EMBL BAA21130.1		PRO_5000140086

Sequences

	Sequence		Length	Mass (Da)
	O33476 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: FCC131A93DC03123	FASTA	461	52,214
	10 20 30 40 50 60 MKKFVALLIT MFFVVSMAAV AQPASAAKYS ELEEGGVIMQ AFYWDVPAGG IWWDTIRSKI 70 80 90 100 110 120 PEWYEAGISA IWIPPASKGM GGAYSMGYDP YDFFDLGEYN QKGTVETRFG SKQELINMIN 130 140 150 160 170 180 TAHAYGIKVI ADIVINHRAG GDLEWNPFVG DYTWTDFSKV ASGKYTANYL DFHPNEVKCC 190 200 210 220 230 240 DEGTFGGFPD IAHEKEWDQH WLWASDESYA AYLRSIGVDA WRFDYVKGYG AWVVKDWLNW 250 260 270 280 290 300 WGGWAVGEYW DTNVDALLNW AYSSGAKVFD FPLYYKMDEA FDNTNIPALV DALQNGGTVV 310 320 330 340 350 360 SRDPFKAVTF VANHDTDIIW NKYPAYAFIL TYEGQPVIFY RDYEEWLNKD KLNNLIWIHD 370 380 390 400 410 420 HLAGGSTSIV YYDSDELIFV RNGDSKRPGL ITYINLGSSK VGRWVYVPKF AGACIHEYTG 430 440 450 460 NLGGWVDKYV ESSGWVYLEA PAYDPASGQY GYTVWSYCGV G

References

[1]

"Cloning and expression of the alpha-amylase gene from the hyperthermophilic archaeon Pyrococcus sp. KOD1, and characterization of the enzyme." Tachibana Y., Mendez L., Fujiwara S., Takagi M., Imanaka T. J. Ferment. Bioeng. 82:224-232(1996) Cited for: NUCLEOTIDE SEQUENCE. Strain: KOD1 EMBL BAA21130.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	D83793 Genomic DNA. Translation: BAA21130.1.
3D structure databases
HSSP	HSSP built from PDB template 1MXG based on UniProtKB O08452.
ProteinModelPortal	O33476.
SMR	O33476. Positions 27-461.
ModBase	Search...
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR013776. A-amylase_thermo. IPR015237. Alpha-amylase_C_pro. IPR015902. Alpha_amylase. IPR006046. Glyco_hydro_13. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF09154. DUF1939. 1 hit. [Graphical view]
PIRSF	PIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTS	PR00110. ALPHAAMYLASE.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

O33476_9EURY

Accession

Primary (citable) accession number: O33476

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	May 31, 2011
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)