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Protein
Submitted name:

CymD

Gene

cymD

Organism
Pseudomonas putida (Arthrobacter siderocapsulatus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
CymDImported
Submitted name:
Outer membrane proteinImported
Gene namesi
Name:cymDImported
OrganismiPseudomonas putida (Arthrobacter siderocapsulatus)Imported
Taxonomic identifieri303 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Structurei

3D structure databases

ProteinModelPortaliO33458.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK06076.

Family and domain databases

InterProiIPR005017. Toluene_X.
[Graphical view]
PfamiPF03349. Toluene_X. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O33458-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKTIYSLSA CGILTCLYCG IASATDAFNL VGVGPVSQGM GGIGAAFNIG
60 70 80 90 100
AQGMMLNPAT LTQMQEGMHL GLGMDIITAE LEVKNTATGE KADSHSRGRN
110 120 130 140 150
NGPYVAPELS LVWRGERYAL GVGAFASDGV GTQFGDTSFL SRTTTNNLNT
160 170 180 190 200
GLENYSRLIV LRIPFSAAYQ VNEKLSVGAS LDAVWTSVNL GLLLDTTQIG
210 220 230 240 250
TLVGQGQVSG SLMPALLSVP ELSAGYLSAD NHRASGGGVD SWGIGGRLGL
260 270 280 290 300
TYQLTPKTRV GIVYNFKTHV GDLSGNADLT AVSAVAGNIP LSGELKLHNF
310 320 330 340 350
EMPASLVAGI SHEFSDQFAV AFDYKRVYWS DVMDDIEVNF KQKATGDTIN
360 370 380 390 400
LKLPFNYRDT NVYSLGAQYR YGANWVFRAG VHYAQLANPS SGTMPIIPST
410 420 430 440 450
PTTSLSGGFS YAFSPEDVVD FSLAYGFKKK VSNDSLPITD KPIEVSHSQI
460
VTSISYTKSF
Length:460
Mass (Da):48,926
Last modified:January 1, 1998 - v1
Checksum:iA29B65F5A2D535AD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U24215 Genomic DNA. Translation: AAB62301.1.
DQ157469 Genomic DNA. Translation: ABA10791.1.
GQ884177 Genomic DNA. Translation: ADI95380.1.

Genome annotation databases

KEGGippx:T1E_4245.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U24215 Genomic DNA. Translation: AAB62301.1.
DQ157469 Genomic DNA. Translation: ABA10791.1.
GQ884177 Genomic DNA. Translation: ADI95380.1.

3D structure databases

ProteinModelPortaliO33458.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGippx:T1E_4245.

Phylogenomic databases

KOiK06076.

Family and domain databases

InterProiIPR005017. Toluene_X.
[Graphical view]
PfamiPF03349. Toluene_X. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "p-cumate catabolic pathway in Pseudomonas putida F1: cloning and characterization of DNA carrying the cmt operon."
    Eaton R.W.
    J. Bacteriol. 178:1351-1362(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: F1Imported.
  2. "p-Cymene catabolic pathway in Pseudomonas putida F1: cloning and characterization of DNA encoding conversion of p-cymene to p-cumate."
    Eaton R.W.
    J. Bacteriol. 179:3171-3180(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: F1Imported.
  3. Mosqueda-Cano G.
    Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DOT-T1EImported.
  4. "Toluene metabolism by the solvent-tolerant Pseudomonas putida DOT-T1 strain, and its role in solvent impermeabilization."
    Mosqueda G., Ramos-Gonzalez M.I., Ramos J.L.
    Gene 232:69-76(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DOT-T1EImported.
  5. "A set of genes encoding a second toluene efflux system in Pseudomonas putida DOT-T1 is linked to the tod genes for toluene metabolism."
    Mosqueda G., Ramos J.L.
    J. Bacteriol. 182:937-943(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DOT-T1EImported.
  6. "Global and cognate regulators control the expression of the organic solvent efflux pumps TtgABC and TtgDEF of Pseudomonas putida."
    Duque E., Segura A., Mosqueda G., Ramos J.L.
    Mol. Microbiol. 39:1100-1106(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DOT-T1EImported.
  7. "Identification and expression of the cym, cmt, and tod catabolic genes from Pseudomonas putida KL47: expression of the regulatory todST genes as a factor for catabolic adaptation."
    Lee K., Ryu E.K., Choi K.S., Cho M.C., Jeong J.J., Choi E.N., Lee S.O., Yoon D.Y., Hwang I., Kim C.K.
    J. Microbiol. 44:192-199(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KL47Imported.
  8. "Global regulation of food supply by Pseudomonas putida DOT-T1E."
    Daniels C., Godoy P., Duque E., Molina-Henares M.A., de la Torre J., Del Arco J.M., Herrera C., Segura A., Guazzaroni M.E., Ferrer M., Ramos J.L.
    Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DOT-T1EImported.

Entry informationi

Entry nameiO33458_PSEPU
AccessioniPrimary (citable) accession number: O33458
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: May 27, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.