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Protein
Submitted name:

Small cold-shock protein

Gene

cspA

Organism
Mycobacterium leprae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Small cold-shock proteinImported
Gene namesi
Name:cspAImported
OrganismiMycobacterium lepraeImported
Taxonomic identifieri1769 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium

Organism-specific databases

LepromaiML2147.

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi272631.ML2147.

Structurei

3D structure databases

ProteinModelPortaliO33052.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini3 – 6563CSPInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 CSD (cold-shock) domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG41090GJ. Bacteria.
COG1278. LUCA.
HOGENOMiHOG000070675.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

O33052-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTGKVKWYD ADKGFGFLSQ EDGEDVYVRS SALPAGVEGL KAGQRVEFGV
60 70 80 90 100
ASGRRGPQAL SLKLIDPPPS FARQVRREAL AEHRHSPDEL HGMVEDMITL
110 120 130
LESTVQPELR KGRYPDRKTA RRVSEVVKAV AREFDA
Length:136
Mass (Da):15,103
Last modified:January 1, 1998 - v1
Checksum:iFEF2B724696D65F0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z99494 Genomic DNA. Translation: CAB16651.1.
PIRiT45339.

Genome annotation databases

PATRICi18058281. VBIMycLep78757_4063.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z99494 Genomic DNA. Translation: CAB16651.1.
PIRiT45339.

3D structure databases

ProteinModelPortaliO33052.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272631.ML2147.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

PATRICi18058281. VBIMycLep78757_4063.

Organism-specific databases

LepromaiML2147.

Phylogenomic databases

eggNOGiENOG41090GJ. Bacteria.
COG1278. LUCA.
HOGENOMiHOG000070675.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Use of an ordered cosmid library to deduce the genomic organization of Mycobacterium leprae."
    Eiglmeier K., Honore N., Woods S.A., Caudron B., Cole S.T.
    Mol. Microbiol. 7:197-206(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Badcock K., Churcher C.M.
    Submitted (SEP-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Parkhill J., Barrell B.G., Rajandream M.A.
    Submitted (SEP-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO33052_MYCLR
AccessioniPrimary (citable) accession number: O33052
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: March 16, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.