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O32528 (YPDI_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 88. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized lipoprotein YpdI
Gene names
Name:ypdI
Ordered Locus Names:b2376, JW2373
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length91 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

General annotation (Comments)

Subcellular location

Cell membrane; Lipid-anchor Probable.

Ontologies

Keywords
   Cellular componentCell membrane
Membrane
   DomainSignal
   PTMLipoprotein
Palmitate
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcolanic acid biosynthetic process

Inferred from mutant phenotype PubMed 15183873. Source: EcoCyc

   Cellular_componentplasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1818 Potential
Chain19 – 9173Uncharacterized lipoprotein YpdI
PRO_0000018059

Amino acid modifications

Lipidation191N-palmitoyl cysteine Potential
Lipidation191S-diacylglycerol cysteine Potential

Sequences

Sequence LengthMass (Da)Tools
O32528 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 49D63F669C31309D

FASTA9110,162
        10         20         30         40         50         60 
MKVNLILFSL FLLVSIMACN VFAFSISGGG SERSYKETEK TSAMTTTHST KLQPSQAILF 

        70         80         90 
KMREDAPPLN LTEEMPPPFP TKANYLIHPV R 

« Hide

References

[1]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00096 Genomic DNA. Translation: AAC75435.1.
AP009048 Genomic DNA. Translation: BAE76706.1.
PIRE65011.
RefSeqNP_416877.1. NC_000913.3.
YP_490618.1. NC_007779.1.

3D structure databases

ProteinModelPortalO32528.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-12820N.
IntActO32528. 1 interaction.
STRING511145.b2376.

Proteomic databases

PRIDEO32528.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC75435; AAC75435; b2376.
BAE76706; BAE76706; BAE76706.
GeneID12931902.
949107.
KEGGecj:Y75_p2343.
eco:b2376.

Organism-specific databases

EchoBASEEB4119.
EcoGeneEG14376. ypdI.

Phylogenomic databases

HOGENOMHOG000122912.
OMASTKANYL.
OrthoDBEOG64BQC6.
ProtClustDBCLSK556392.

Enzyme and pathway databases

BioCycEcoCyc:G7239-MONOMER.
ECOL316407:JW2373-MONOMER.

Gene expression databases

GenevestigatorO32528.

Family and domain databases

PROSITEPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROO32528.

Entry information

Entry nameYPDI_ECOLI
AccessionPrimary (citable) accession number: O32528
Secondary accession number(s): Q2MAK0
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 1, 1998
Last modified: March 19, 2014
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene