O32528 (YPDI_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized lipoprotein YpdI

Gene names

Name:	ypdI
Ordered Locus Names:	b2376, JW2373

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	91 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

General annotation (Comments)

Subcellular location

Cell membrane; Lipid-anchor Probable.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Signal
PTM	Lipoprotein Palmitate
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	colanic acid biosynthetic process Inferred from mutant phenotype PubMed 15183873. Source: EcoCyc
Cellular_component	plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 18	18	Potential
	Chain	19 – 91	73	Uncharacterized lipoprotein YpdI		PRO_0000018059
Amino acid modifications
	Lipidation	19	1	N-palmitoyl cysteine Potential
	Lipidation	19	1	S-diacylglycerol cysteine Potential

Sequences

	Sequence		Length	Mass (Da)
	O32528 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 49D63F669C31309D	FASTA	91	10,162
	10 20 30 40 50 60 MKVNLILFSL FLLVSIMACN VFAFSISGGG SERSYKETEK TSAMTTTHST KLQPSQAILF 70 80 90 KMREDAPPLN LTEEMPPPFP TKANYLIHPV R

References

[1]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[2]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00096 Genomic DNA. Translation: AAC75435.1. AP009048 Genomic DNA. Translation: BAE76706.1.
PIR	E65011.
RefSeq	NP_416877.1. NC_000913.2. YP_490618.1. NC_007779.1.
3D structure databases
ProteinModelPortal	O32528.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-12820N.
IntAct	O32528. 1 interaction.
STRING	511145.b2376.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC75435; AAC75435; b2376. BAE76706; BAE76706; BAE76706.
GeneID	12931902. 949107.
KEGG	ecj:Y75_p2343. eco:b2376.
Organism-specific databases
EchoBASE	EB4119.
EcoGene	EG14376. ypdI.
Phylogenomic databases
HOGENOM	HOG000122912.
OMA	TEKTSMM.
ProtClustDB	CLSK556392.
Enzyme and pathway databases
BioCyc	EcoCyc:G7239-MONOMER. ECOL316407:JW2373-MONOMER.
Gene expression databases
Genevestigator	O32528.
Family and domain databases
PROSITE	PS51257. PROKAR_LIPOPROTEIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YPDI_ECOLI

Accession

Primary (citable) accession number: O32528
Secondary accession number(s): Q2MAK0

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 15, 1998
Last sequence update:	January 1, 1998
Last modified:	May 1, 2013
This is version 83 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program