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O32528

- YPDI_ECOLI

UniProt

O32528 - YPDI_ECOLI

Protein

Uncharacterized lipoprotein YpdI

Gene

ypdI

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Biological processi

    1. colanic acid biosynthetic process Source: EcoCyc

    Enzyme and pathway databases

    BioCyciEcoCyc:G7239-MONOMER.
    ECOL316407:JW2373-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized lipoprotein YpdI
    Gene namesi
    Name:ypdI
    Ordered Locus Names:b2376, JW2373
    OrganismiEscherichia coli (strain K12)
    Taxonomic identifieri83333 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

    Organism-specific databases

    EcoGeneiEG14376. ypdI.

    Subcellular locationi

    Cell membrane Curated; Lipid-anchor Curated

    GO - Cellular componenti

    1. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 1818PROSITE-ProRule annotationAdd
    BLAST
    Chaini19 – 9173Uncharacterized lipoprotein YpdIPRO_0000018059Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Lipidationi19 – 191N-palmitoyl cysteinePROSITE-ProRule annotation
    Lipidationi19 – 191S-diacylglycerol cysteinePROSITE-ProRule annotation

    Keywords - PTMi

    Lipoprotein, Palmitate

    Proteomic databases

    PRIDEiO32528.

    Expressioni

    Gene expression databases

    GenevestigatoriO32528.

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-12820N.
    IntActiO32528. 1 interaction.
    STRINGi511145.b2376.

    Structurei

    3D structure databases

    ProteinModelPortaliO32528.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    HOGENOMiHOG000122912.
    OMAiSTKANYL.
    OrthoDBiEOG64BQC6.

    Family and domain databases

    PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    O32528-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKVNLILFSL FLLVSIMACN VFAFSISGGG SERSYKETEK TSAMTTTHST   50
    KLQPSQAILF KMREDAPPLN LTEEMPPPFP TKANYLIHPV R 91
    Length:91
    Mass (Da):10,162
    Last modified:January 1, 1998 - v1
    Checksum:i49D63F669C31309D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00096 Genomic DNA. Translation: AAC75435.1.
    AP009048 Genomic DNA. Translation: BAE76706.1.
    PIRiE65011.
    RefSeqiNP_416877.1. NC_000913.3.
    YP_490618.1. NC_007779.1.

    Genome annotation databases

    EnsemblBacteriaiAAC75435; AAC75435; b2376.
    BAE76706; BAE76706; BAE76706.
    GeneIDi12931902.
    949107.
    KEGGiecj:Y75_p2343.
    eco:b2376.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00096 Genomic DNA. Translation: AAC75435.1 .
    AP009048 Genomic DNA. Translation: BAE76706.1 .
    PIRi E65011.
    RefSeqi NP_416877.1. NC_000913.3.
    YP_490618.1. NC_007779.1.

    3D structure databases

    ProteinModelPortali O32528.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-12820N.
    IntActi O32528. 1 interaction.
    STRINGi 511145.b2376.

    Proteomic databases

    PRIDEi O32528.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC75435 ; AAC75435 ; b2376 .
    BAE76706 ; BAE76706 ; BAE76706 .
    GeneIDi 12931902.
    949107.
    KEGGi ecj:Y75_p2343.
    eco:b2376.

    Organism-specific databases

    EchoBASEi EB4119.
    EcoGenei EG14376. ypdI.

    Phylogenomic databases

    HOGENOMi HOG000122912.
    OMAi STKANYL.
    OrthoDBi EOG64BQC6.

    Enzyme and pathway databases

    BioCyci EcoCyc:G7239-MONOMER.
    ECOL316407:JW2373-MONOMER.

    Miscellaneous databases

    PROi O32528.

    Gene expression databases

    Genevestigatori O32528.

    Family and domain databases

    PROSITEi PS51257. PROKAR_LIPOPROTEIN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / MG1655 / ATCC 47076.
    2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
      Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
      Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

    Entry informationi

    Entry nameiYPDI_ECOLI
    AccessioniPrimary (citable) accession number: O32528
    Secondary accession number(s): Q2MAK0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 1998
    Last sequence update: January 1, 1998
    Last modified: October 1, 2014
    This is version 90 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Escherichia coli
      Escherichia coli (strain K12): entries and cross-references to EcoGene

    External Data

    Dasty 3