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O32483 (CAPP_RHOPA) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase

Short name=PEPC
Short name=PEPCase
EC=4.1.1.31
Gene names
Name:ppc
Ordered Locus Names:RPA1772
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP]
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length936 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. HAMAP-Rule MF_00595

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family.

Ontologies

Keywords
   Biological processCarbon dioxide fixation
   LigandMagnesium
   Molecular functionLyase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

oxaloacetate metabolic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

tricarboxylic acid cycle

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

phosphoenolpyruvate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 936936Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595
PRO_0000166618

Sites

Active site1641 By similarity
Active site5981 By similarity

Experimental info

Sequence conflict511S → T in BAA21835. Ref.1
Sequence conflict791A → E in BAA21835. Ref.1
Sequence conflict881Q → P in BAA21835. Ref.1
Sequence conflict1821G → S in BAA21835. Ref.1
Sequence conflict1981T → A in BAA21835. Ref.1
Sequence conflict263 – 2664ANAE → VNSD in BAA21835. Ref.1
Sequence conflict3111E → D in BAA21835. Ref.1
Sequence conflict404 – 4063THH → QHN in BAA21835. Ref.1
Sequence conflict4461G → T in BAA21835. Ref.1
Sequence conflict4601V → M in BAA21835. Ref.1
Sequence conflict4641D → E in BAA21835. Ref.1
Sequence conflict5301L → V in BAA21835. Ref.1
Sequence conflict6711S → R in BAA21835. Ref.1
Sequence conflict7981E → A in BAA21835. Ref.1
Sequence conflict8021K → T in BAA21835. Ref.1
Sequence conflict8091A → K in BAA21835. Ref.1
Sequence conflict846 – 8505TAIRD → VDVRE in BAA21835. Ref.1
Sequence conflict8541S → G in BAA21835. Ref.1
Sequence conflict8651D → E in BAA21835. Ref.1
Sequence conflict8681L → F in BAA21835. Ref.1
Sequence conflict8751H → R in BAA21835. Ref.1

Sequences

Sequence LengthMass (Da)Tools
O32483 [UniParc].

Last modified February 16, 2004. Version 2.
Checksum: F95CF9565356EA4F

FASTA936104,139
        10         20         30         40         50         60 
MSSLNLSAGP EPVSERPDDA AAIEAETRLR NDIRLLGRIL GDTVREQEGQ SVFDLVENIR 

        70         80         90        100        110        120 
QTSIRFHRDD DKTARAELAA ILDGMSIQDT MRIVRAFSYF SHLANIAEDQ NNIRQMRAGS 

       130        140        150        160        170        180 
TAGSAPRAGL LAKTLAHARQ EGISAAELRK FFATALVSPV LTAHPTEVRR KSTMDREMQI 

       190        200        210        220        230        240 
AGLLDQRDRV QLTADEWTDN EERLRRAVET LWKTNLLRRT KLTVLDEVTN GLSFYDYTFL 

       250        260        270        280        290        300 
REVPRLHSAL EDRLADAAKA EGANAEGELA SFLRMGSWIG GDRDGNPFVT AEVLHGTLKL 

       310        320        330        340        350        360 
QSTRVLRYYL EELHELGSEL SLASHLAGTT DTVKALAETS PDTSPHRKYE PYRLAVSGIY 

       370        380        390        400        410        420 
ARLAATALKL EVENLRAPVG EAEPYASAQD FKADLDAIHL SLTTHHSGVI ARGRLRQLRR 

       430        440        450        460        470        480 
AIDCFGFHLA SLDMRQNSAV HERTIGELMD AARPGTSYAV LDEDARIALL ISELRSTRPL 

       490        500        510        520        530        540 
TSMFVKYSDE TVGELAVFRE AAKAHATYGA AAIPQCIISM TKGVSDLLEL AVLLKEVGLI 

       550        560        570        580        590        600 
DPSGRSAINV VPLFETIEDL QACAKIMDRL LSIPEYRRLV DSRGSVQEVM LGYSDSNKDG 

       610        620        630        640        650        660 
GFVTSGWELY KAEIGLIEIF EHHGVRLRLF HGRGGSVGRG GGPSYDAIVA QPGGAVNGQI 

       670        680        690        700        710        720 
RITEQGEIIT SKYSNVEVGR NNLEILAAAT LEASLLQPKR VAPHRDYLEA MEQLSALAFK 

       730        740        750        760        770        780 
AYRGLVYETD GFVDYFWAST VINEISTLNI GSRPASRKKT RAIEDLRAIP WVFSWAQCRL 

       790        800        810        820        830        840 
MLPGWYGFGS AVSAWVTEHP EKGIAFLQAM YQEWPFFRTL LSNMDMVLSK SSIGIASRYA 

       850        860        870        880        890        900 
ELVEDTAIRD RIFSRIRAEW HSSIDYLLAI MQQDHLLQSN PLLERSIRHR FPYLDPLNHV 

       910        920        930 
QVQLLREHRT HDPDEQVLRG VQLTINGISA GLRNSG 

« Hide

References

« Hide 'large scale' references
[1]"Structural and functional analysis of the phosphoenolpyruvate carboxylase gene from the purple nonsulfur bacterium Rhodopseudomonas palustris No. 7."
Inui M., Dumay V., Zahn K., Yamagata H., Yukawa H.
J. Bacteriol. 179:4942-4945(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 7.
[2]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D89668 Genomic DNA. Translation: BAA21835.1.
BX572598 Genomic DNA. Translation: CAE27213.1.
RefSeqNP_947117.1. NC_005296.1.

3D structure databases

ProteinModelPortalO32483.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA1772.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE27213; CAE27213; RPA1772.
GeneID2692915.
KEGGrpa:RPA1772.
PATRIC23287823. VBIRhoPal84835_1848.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2352.
HOGENOMHOG000238647.
KOK01595.
OMAGIQITIN.
OrthoDBEOG6TJ7T8.
PhylomeDBO32483.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCAPP_RHOPA
AccessionPrimary (citable) accession number: O32483
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 16, 2004
Last modified: July 9, 2014
This is version 86 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families