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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.

Cofactori

Mg2+By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei164 – 1641By similarity
Active sitei598 – 5981By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Carbon dioxide fixation

Keywords - Ligandi

Magnesium

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Short name:
PEPC
Short name:
PEPCase
Gene namesi
Name:ppc
Ordered Locus Names:RPA1772
OrganismiRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Taxonomic identifieri258594 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001426 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 936936Phosphoenolpyruvate carboxylasePRO_0000166618Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi258594.RPA1772.

Structurei

3D structure databases

ProteinModelPortaliO32483.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.Curated

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiWGFAVIE.
OrthoDBiEOG6TJ7T8.
PhylomeDBiO32483.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O32483-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSLNLSAGP EPVSERPDDA AAIEAETRLR NDIRLLGRIL GDTVREQEGQ
60 70 80 90 100
SVFDLVENIR QTSIRFHRDD DKTARAELAA ILDGMSIQDT MRIVRAFSYF
110 120 130 140 150
SHLANIAEDQ NNIRQMRAGS TAGSAPRAGL LAKTLAHARQ EGISAAELRK
160 170 180 190 200
FFATALVSPV LTAHPTEVRR KSTMDREMQI AGLLDQRDRV QLTADEWTDN
210 220 230 240 250
EERLRRAVET LWKTNLLRRT KLTVLDEVTN GLSFYDYTFL REVPRLHSAL
260 270 280 290 300
EDRLADAAKA EGANAEGELA SFLRMGSWIG GDRDGNPFVT AEVLHGTLKL
310 320 330 340 350
QSTRVLRYYL EELHELGSEL SLASHLAGTT DTVKALAETS PDTSPHRKYE
360 370 380 390 400
PYRLAVSGIY ARLAATALKL EVENLRAPVG EAEPYASAQD FKADLDAIHL
410 420 430 440 450
SLTTHHSGVI ARGRLRQLRR AIDCFGFHLA SLDMRQNSAV HERTIGELMD
460 470 480 490 500
AARPGTSYAV LDEDARIALL ISELRSTRPL TSMFVKYSDE TVGELAVFRE
510 520 530 540 550
AAKAHATYGA AAIPQCIISM TKGVSDLLEL AVLLKEVGLI DPSGRSAINV
560 570 580 590 600
VPLFETIEDL QACAKIMDRL LSIPEYRRLV DSRGSVQEVM LGYSDSNKDG
610 620 630 640 650
GFVTSGWELY KAEIGLIEIF EHHGVRLRLF HGRGGSVGRG GGPSYDAIVA
660 670 680 690 700
QPGGAVNGQI RITEQGEIIT SKYSNVEVGR NNLEILAAAT LEASLLQPKR
710 720 730 740 750
VAPHRDYLEA MEQLSALAFK AYRGLVYETD GFVDYFWAST VINEISTLNI
760 770 780 790 800
GSRPASRKKT RAIEDLRAIP WVFSWAQCRL MLPGWYGFGS AVSAWVTEHP
810 820 830 840 850
EKGIAFLQAM YQEWPFFRTL LSNMDMVLSK SSIGIASRYA ELVEDTAIRD
860 870 880 890 900
RIFSRIRAEW HSSIDYLLAI MQQDHLLQSN PLLERSIRHR FPYLDPLNHV
910 920 930
QVQLLREHRT HDPDEQVLRG VQLTINGISA GLRNSG
Length:936
Mass (Da):104,139
Last modified:February 16, 2004 - v2
Checksum:iF95CF9565356EA4F
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti51 – 511S → T in BAA21835 (PubMed:9244286).Curated
Sequence conflicti79 – 791A → E in BAA21835 (PubMed:9244286).Curated
Sequence conflicti88 – 881Q → P in BAA21835 (PubMed:9244286).Curated
Sequence conflicti182 – 1821G → S in BAA21835 (PubMed:9244286).Curated
Sequence conflicti198 – 1981T → A in BAA21835 (PubMed:9244286).Curated
Sequence conflicti263 – 2664ANAE → VNSD in BAA21835 (PubMed:9244286).Curated
Sequence conflicti311 – 3111E → D in BAA21835 (PubMed:9244286).Curated
Sequence conflicti404 – 4063THH → QHN in BAA21835 (PubMed:9244286).Curated
Sequence conflicti446 – 4461G → T in BAA21835 (PubMed:9244286).Curated
Sequence conflicti460 – 4601V → M in BAA21835 (PubMed:9244286).Curated
Sequence conflicti464 – 4641D → E in BAA21835 (PubMed:9244286).Curated
Sequence conflicti530 – 5301L → V in BAA21835 (PubMed:9244286).Curated
Sequence conflicti671 – 6711S → R in BAA21835 (PubMed:9244286).Curated
Sequence conflicti798 – 7981E → A in BAA21835 (PubMed:9244286).Curated
Sequence conflicti802 – 8021K → T in BAA21835 (PubMed:9244286).Curated
Sequence conflicti809 – 8091A → K in BAA21835 (PubMed:9244286).Curated
Sequence conflicti846 – 8505TAIRD → VDVRE in BAA21835 (PubMed:9244286).Curated
Sequence conflicti854 – 8541S → G in BAA21835 (PubMed:9244286).Curated
Sequence conflicti865 – 8651D → E in BAA21835 (PubMed:9244286).Curated
Sequence conflicti868 – 8681L → F in BAA21835 (PubMed:9244286).Curated
Sequence conflicti875 – 8751H → R in BAA21835 (PubMed:9244286).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D89668 Genomic DNA. Translation: BAA21835.1.
BX572598 Genomic DNA. Translation: CAE27213.1.
RefSeqiWP_011157278.1. NC_005296.1.

Genome annotation databases

EnsemblBacteriaiCAE27213; CAE27213; RPA1772.
KEGGirpa:RPA1772.
PATRICi23287823. VBIRhoPal84835_1848.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D89668 Genomic DNA. Translation: BAA21835.1.
BX572598 Genomic DNA. Translation: CAE27213.1.
RefSeqiWP_011157278.1. NC_005296.1.

3D structure databases

ProteinModelPortaliO32483.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi258594.RPA1772.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE27213; CAE27213; RPA1772.
KEGGirpa:RPA1772.
PATRICi23287823. VBIRhoPal84835_1848.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiWGFAVIE.
OrthoDBiEOG6TJ7T8.
PhylomeDBiO32483.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Structural and functional analysis of the phosphoenolpyruvate carboxylase gene from the purple nonsulfur bacterium Rhodopseudomonas palustris No. 7."
    Inui M., Dumay V., Zahn K., Yamagata H., Yukawa H.
    J. Bacteriol. 179:4942-4945(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 7.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-98 / CGA009.

Entry informationi

Entry nameiCAPP_RHOPA
AccessioniPrimary (citable) accession number: O32483
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 16, 2004
Last modified: July 22, 2015
This is version 94 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.