Unreviewed, UniProtKB/TrEMBL O32374 (O32374_CLOTM)

Names and origin

Protein names

Submitted name:
    Xylanase EMBL BAA21516.2

Gene names

Name:

xynC EMBL BAA21516.2

Organism

Clostridium thermocellum EMBL BAA21516.2

Taxonomic identifier

1515 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	619 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432V0

Ontologies

Keywords
Biological process	Xylan degradation EMBL BAA21516.2
Domain	Signal
Molecular function	Glycosidase RuleBase RU003432V0 Hydrolase
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 32	32	Potential EMBL BAA21516.2
	Chain	33 – 619	587	Potential EMBL BAA21516.2		PRO_5000140108

Sequences

	Sequence		Length	Mass (Da)
	O32374-1 [UniParc]. Last modified November 1, 1999. Version 2. Checksum: 3AC2AE8566BB039C	FASTA	619	69,518
	10 20 30 40 50 60 MLKKKLLTLL TVFALLTVGI CGSFLPLPKA SAAALIYDDF ETGLNGWGPR GPETVELTTE 70 80 90 100 110 120 EAYSGRYSLK VSGRTSTWNG PMVDKTDVLT LGESYKLGVY VKFVGDSYSN EQRFSLQLQY 130 140 150 160 170 180 NDGAGDVYQN IKTATVYKGT WTLLEGQLTV PSHAKDVKIY VETEFKNSPS PQDLMDFYID 190 200 210 220 230 240 DFTATPANLP EIEKDIPSLK DVFAGYFKVG GAATVAELAP KPAKELFLKH YNSLTFGNEL 250 260 270 280 290 300 KPESVLDYDA TIAYMEANGG DQVNPQITLR AARPLLEFAK EHNIPVRGHT LVWHSQTPDW 310 320 330 340 350 360 FFRENYSQDE NAPWASKEVM LQRLENYIKN LMEALATEYP TVKFYAWDVV NEAVDPNTSD 370 380 390 400 410 420 GMRTPGSNNK NPGSSLWMQT VGRDFIVKAF EYARKYAPAD CKLFYNDYNE YEDRKCDFII 430 440 450 460 470 480 EILTELKAKG LVDGMGMQSH WVMDYPSISM FEKSIRRYAA LGLEIQLTEL DIRNPDNSQW 490 500 510 520 530 540 ALERQANRYK ELVTKLVDLK KEGINITALV FWGITDATSW LGGYPLLFDA EYKAKPAFYA 550 560 570 580 590 600 IVNSVPPLPT EPPVQVIPGD VNGDGRVNSS DLTLMKRYLL KSISDFPTPE GKIAADLNED 610 GKVNSTDLLA LKKLVLREL

References

[1]

"Sequence of xynC and properties of XynC, a major component of the Clostridium thermocellum cellulosome." Hayashi H., Takagi K.I., Fukumura M., Kimura T., Karita S., Sakka K., Ohmiya K. J. Bacteriol. 179:4246-4253(1997) [PubMed: 9209040] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: F1 EMBL BAA21516.2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	D84188 Genomic DNA. Translation: BAA21516.2.
3D structure databases
HSSP	HSSP built from PDB template 1DAV based on UniProtKB P38686.
ModBase	Search...
Protein family/group databases
CAZy	CBM22. Carbohydrate-Binding Module Family 22. GH10. Glycoside Hydrolase Family 10.
Family and domain databases
InterPro	IPR002105. Cellulos_enz_dockerin_1_Ca-bd. IPR003305. CenC_carb_bd. IPR018242. Dockerin_1. IPR018247. EF_HAND_1. IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF02018. CBM_4_9. 1 hit. PF00404. Dockerin_1. 2 hits. PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
PROSITE	PS00448. CLOS_CELLULOSOME_RPT. 2 hits. PS00018. EF_HAND_1. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O32374_CLOTM

Accession

Primary (citable) accession number: O32374

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	November 1, 1999
Last modified:	June 16, 2009
This is version 52 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)