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Protein

Beta-xylanase

Gene

xynC

Organism
Clostridium thermocellum (Ruminiclostridium thermocellum)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

  • endo-1,4-beta-xylanase activity Source: UniProtKB-EC
  • xylan endo-1,3-beta-xylosidase activity Source: MENGO

GO - Biological processi

  • xylan catabolic process Source: MENGO

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Enzyme and pathway databases

BRENDAi3.2.1.8 1530

Protein family/group databases

CAZyiCBM22 Carbohydrate-Binding Module Family 22
GH10 Glycoside Hydrolase Family 10

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:xynCImported
OrganismiClostridium thermocellum (Ruminiclostridium thermocellum)Imported
Taxonomic identifieri1515 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminiclostridium

Interactioni

Protein-protein interaction databases

IntActiO32374, 1 interactor

Structurei

3D structure databases

ProteinModelPortaliO32374
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D9F Bacteria
COG3693 LUCA

Family and domain databases

Gene3Di2.60.120.260, 1 hit
InterProiView protein in InterPro
IPR003305 CenC_carb-bd
IPR002105 Dockerin_1_rpt
IPR016134 Dockerin_dom
IPR036439 Dockerin_dom_sf
IPR018247 EF_Hand_1_Ca_BS
IPR008979 Galactose-bd-like_sf
IPR001000 GH10
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF02018 CBM_4_9, 1 hit
PF00404 Dockerin_1, 2 hits
PF00331 Glyco_hydro_10, 1 hit
PRINTSiPR00134 GLHYDRLASE10
SMARTiView protein in SMART
SM00633 Glyco_10, 1 hit
SUPFAMiSSF49785 SSF49785, 1 hit
SSF51445 SSF51445, 1 hit
SSF63446 SSF63446, 1 hit
PROSITEiView protein in PROSITE
PS00448 CLOS_CELLULOSOME_RPT, 2 hits
PS51766 DOCKERIN, 1 hit
PS00018 EF_HAND_1, 2 hits
PS51760 GH10_2, 1 hit

Sequencei

Sequence statusi: Complete.

O32374-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKKKLLTLL TVFALLTVGI CGSFLPLPKA SAAALIYDDF ETGLNGWGPR
60 70 80 90 100
GPETVELTTE EAYSGRYSLK VSGRTSTWNG PMVDKTDVLT LGESYKLGVY
110 120 130 140 150
VKFVGDSYSN EQRFSLQLQY NDGAGDVYQN IKTATVYKGT WTLLEGQLTV
160 170 180 190 200
PSHAKDVKIY VETEFKNSPS PQDLMDFYID DFTATPANLP EIEKDIPSLK
210 220 230 240 250
DVFAGYFKVG GAATVAELAP KPAKELFLKH YNSLTFGNEL KPESVLDYDA
260 270 280 290 300
TIAYMEANGG DQVNPQITLR AARPLLEFAK EHNIPVRGHT LVWHSQTPDW
310 320 330 340 350
FFRENYSQDE NAPWASKEVM LQRLENYIKN LMEALATEYP TVKFYAWDVV
360 370 380 390 400
NEAVDPNTSD GMRTPGSNNK NPGSSLWMQT VGRDFIVKAF EYARKYAPAD
410 420 430 440 450
CKLFYNDYNE YEDRKCDFII EILTELKAKG LVDGMGMQSH WVMDYPSISM
460 470 480 490 500
FEKSIRRYAA LGLEIQLTEL DIRNPDNSQW ALERQANRYK ELVTKLVDLK
510 520 530 540 550
KEGINITALV FWGITDATSW LGGYPLLFDA EYKAKPAFYA IVNSVPPLPT
560 570 580 590 600
EPPVQVIPGD VNGDGRVNSS DLTLMKRYLL KSISDFPTPE GKIAADLNED
610
GKVNSTDLLA LKKLVLREL
Length:619
Mass (Da):69,518
Last modified:November 1, 1999 - v2
Checksum:i3AC2AE8566BB039C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D84188 Genomic DNA Translation: BAA21516.2
RefSeqiWP_003513765.1, NZ_OCMV01000002.1

Genome annotation databases

GeneIDi35804769

Similar proteinsi

Entry informationi

Entry nameiO32374_CLOTM
AccessioniPrimary (citable) accession number: O32374
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: November 1, 1999
Last modified: April 25, 2018
This is version 95 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health