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Protein

Uncharacterized N-acetyltransferase YvbK

Gene

yvbK

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Probable N-acetyltransferase.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Acyltransferase, Transferase

Enzyme and pathway databases

BioCyciBSUB:BSU33890-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized N-acetyltransferase YvbK (EC:2.3.1.-)
Gene namesi
Name:yvbK
Ordered Locus Names:BSU33890
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 155155Uncharacterized N-acetyltransferase YvbKPRO_0000359974Add
BLAST

Proteomic databases

PaxDbiO32248.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100018381.

Structurei

Secondary structure

1
155
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi7 – 104Combined sources
Helixi16 – 2510Combined sources
Helixi29 – 3810Combined sources
Beta strandi39 – 468Combined sources
Beta strandi49 – 5810Combined sources
Beta strandi63 – 719Combined sources
Helixi73 – 753Combined sources
Helixi80 – 9415Combined sources
Beta strandi98 – 1058Combined sources
Helixi109 – 1179Combined sources
Beta strandi121 – 1266Combined sources
Helixi129 – 1324Combined sources
Beta strandi138 – 1403Combined sources
Beta strandi143 – 1453Combined sources
Beta strandi148 – 1547Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1YVKX-ray3.01A/B/C/D1-155[»]
ProteinModelPortaliO32248.
SMRiO32248. Positions 5-155.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO32248.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 155150N-acetyltransferasePROSITE-ProRule annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni69 – 713Coenzyme A binding
Regioni77 – 826Coenzyme A binding
Regioni111 – 1177Coenzyme A binding

Sequence similaritiesi

Contains 1 N-acetyltransferase domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4108W0I. Bacteria.
ENOG4111P9X. LUCA.
HOGENOMiHOG000054578.
InParanoidiO32248.
OMAiDFFLRHY.
OrthoDBiEOG6FFSBH.
PhylomeDBiO32248.

Family and domain databases

Gene3Di3.40.630.30. 1 hit.
InterProiIPR016181. Acyl_CoA_acyltransferase.
IPR000182. GNAT_dom.
[Graphical view]
PfamiPF00583. Acetyltransf_1. 1 hit.
[Graphical view]
SUPFAMiSSF55729. SSF55729. 1 hit.
PROSITEiPS51186. GNAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O32248-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNMQKLRIEL GEETNDELYD LLLLADPSKD IVDEYLERGE CYTAWAGDEL
60 70 80 90 100
AGVYVLLKTR PQTVEIVNIA VKESLQKKGF GKQLVLDAIE KAKKLGADTI
110 120 130 140 150
EIGTGNSSIH QLSLYQKCGF RIQAIDHDFF LRHYDEDIFE NGIQCRDMVR

LYLDL
Length:155
Mass (Da):17,745
Last modified:January 1, 1998 - v1
Checksum:i45966AB5F18D1443
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB15394.1.
PIRiB70030.
RefSeqiNP_391269.1. NC_000964.3.
WP_003228335.1. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB15394; CAB15394; BSU33890.
GeneIDi938642.
KEGGibsu:BSU33890.
PATRICi18978778. VBIBacSub10457_3552.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB15394.1.
PIRiB70030.
RefSeqiNP_391269.1. NC_000964.3.
WP_003228335.1. NC_000964.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1YVKX-ray3.01A/B/C/D1-155[»]
ProteinModelPortaliO32248.
SMRiO32248. Positions 5-155.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100018381.

Proteomic databases

PaxDbiO32248.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB15394; CAB15394; BSU33890.
GeneIDi938642.
KEGGibsu:BSU33890.
PATRICi18978778. VBIBacSub10457_3552.

Phylogenomic databases

eggNOGiENOG4108W0I. Bacteria.
ENOG4111P9X. LUCA.
HOGENOMiHOG000054578.
InParanoidiO32248.
OMAiDFFLRHY.
OrthoDBiEOG6FFSBH.
PhylomeDBiO32248.

Enzyme and pathway databases

BioCyciBSUB:BSU33890-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO32248.

Family and domain databases

Gene3Di3.40.630.30. 1 hit.
InterProiIPR016181. Acyl_CoA_acyltransferase.
IPR000182. GNAT_dom.
[Graphical view]
PfamiPF00583. Acetyltransf_1. 1 hit.
[Graphical view]
SUPFAMiSSF55729. SSF55729. 1 hit.
PROSITEiPS51186. GNAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  2. "Crystal structure of the Bacillis subtilis acetyltransferase in complex with CoA, northeast structural genomics target SR237."
    Northeast structural genomics consortium (NESG)
    Submitted (APR-2005) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (3.01 ANGSTROMS) IN COMPLEX WITH COENZYME A.
    Strain: 168.

Entry informationi

Entry nameiYVBK_BACSU
AccessioniPrimary (citable) accession number: O32248
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: February 17, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.