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Protein

Uncharacterized HTH-type transcriptional regulator YusT

Gene

yusT

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi18 – 3720H-T-H motifPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciBSUB:BSU32920-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YusT
Gene namesi
Name:yusT
Ordered Locus Names:BSU32920
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 295295Uncharacterized HTH-type transcriptional regulator YusTPRO_0000105821Add
BLAST

Proteomic databases

PaxDbiO32186.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100017866.

Structurei

3D structure databases

ProteinModelPortaliO32186.
SMRiO32186. Positions 1-289.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 5858HTH lysR-typePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH lysR-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105EGI. Bacteria.
ENOG410XR3F. LUCA.
HOGENOMiHOG000233521.
InParanoidiO32186.
OMAiFIGCECH.
PhylomeDBiO32186.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O32186-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MESGDLRVFQ MVAREGTITK AALQLGYVQS NVTARIQQLE AELGTTLFLR
60 70 80 90 100
HNRGMTLSAS GKLLLDYANK IIGLLDEASK ALSSSAEPSG PLMIGCTQTT
110 120 130 140 150
AAVRLPKLLA SYYEEHPNVQ LSLTTGHTQF LLDKVLRYEL DGAFIGCECH
160 170 180 190 200
HPELESYPAF EEEPVVVSAA SVPDVEEAIT KPILVYSTGC SYRETLEKWL
210 220 230 240 250
RSVGVTQPVI MEFGTLEAII GGVTAGLGIS LLPRTVVQKH EAEGSIRLYP
260 270 280 290
LPEALSQMKT EFIVRKDSFI SSALRTFMDS FTPVKTAESQ KSSLL
Length:295
Mass (Da):32,229
Last modified:January 1, 1998 - v1
Checksum:i5E27E78B76BA341C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB15281.1.
PIRiE70022.
RefSeqiNP_391171.1. NC_000964.3.
WP_003228551.1. NZ_JNCM01000033.1.

Genome annotation databases

EnsemblBacteriaiCAB15281; CAB15281; BSU32920.
GeneIDi938601.
KEGGibsu:BSU32920.
PATRICi18978568. VBIBacSub10457_3447.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB15281.1.
PIRiE70022.
RefSeqiNP_391171.1. NC_000964.3.
WP_003228551.1. NZ_JNCM01000033.1.

3D structure databases

ProteinModelPortaliO32186.
SMRiO32186. Positions 1-289.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100017866.

Proteomic databases

PaxDbiO32186.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB15281; CAB15281; BSU32920.
GeneIDi938601.
KEGGibsu:BSU32920.
PATRICi18978568. VBIBacSub10457_3447.

Phylogenomic databases

eggNOGiENOG4105EGI. Bacteria.
ENOG410XR3F. LUCA.
HOGENOMiHOG000233521.
InParanoidiO32186.
OMAiFIGCECH.
PhylomeDBiO32186.

Enzyme and pathway databases

BioCyciBSUB:BSU32920-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYUST_BACSU
AccessioniPrimary (citable) accession number: O32186
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: January 1, 1998
Last modified: September 7, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.