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Protein

Uncharacterized HTH-type transcriptional regulator YusO

Gene

yusO

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi54 – 77H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU32870-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YusO
Gene namesi
Name:yusO
Ordered Locus Names:BSU32870
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003605551 – 155Uncharacterized HTH-type transcriptional regulator YusOAdd BLAST155

Proteomic databases

PaxDbiO32181
PRIDEiO32181

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100017841

Structurei

Secondary structure

1155
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi4 – 32Combined sources29
Helixi37 – 49Combined sources13
Beta strandi50 – 53Combined sources4
Helixi54 – 61Combined sources8
Helixi65 – 77Combined sources13
Beta strandi80 – 85Combined sources6
Beta strandi92 – 97Combined sources6
Helixi99 – 120Combined sources22
Helixi125 – 143Combined sources19

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1S3JX-ray2.25A/B1-155[»]
ProteinModelPortaliO32181
SMRiO32181
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO32181

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 140HTH marR-typePROSITE-ProRule annotationAdd BLAST137

Phylogenomic databases

eggNOGiENOG41067TZ Bacteria
ENOG410XUB6 LUCA
HOGENOMiHOG000292199
InParanoidiO32181
OMAiMEVKPSA
PhylomeDBiO32181

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR000835 HTH_MarR-typ
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF01047 MarR, 1 hit
PRINTSiPR00598 HTHMARR
SMARTiView protein in SMART
SM00347 HTH_MARR, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50995 HTH_MARR_2, 1 hit

Sequencei

Sequence statusi: Complete.

O32181-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSADQLMSD IQLSLQALFQ KIQPEMLESM EKQGVTPAQL FVLASLKKHG
60 70 80 90 100
SLKVSEIAER MEVKPSAVTL MADRLEQKNL IARTHNTKDR RVIDLSLTDE
110 120 130 140 150
GDIKFEEVLA GRKAIMARYL SFLTEEEMLQ AAHITAKLAQ AAETDEKQNM

KRGNG
Length:155
Mass (Da):17,400
Last modified:January 1, 1998 - v1
Checksum:i21B31E4B1E4ED0BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA Translation: CAB15276.1
PIRiH70021
RefSeqiNP_391166.1, NC_000964.3
WP_003242592.1, NZ_JNCM01000033.1

Genome annotation databases

EnsemblBacteriaiCAB15276; CAB15276; BSU32870
GeneIDi935923
KEGGibsu:BSU32870
PATRICifig|224308.179.peg.3563

Entry informationi

Entry nameiYUSO_BACSU
AccessioniPrimary (citable) accession number: O32181
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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