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Protein

Uncharacterized RNA pseudouridine synthase YtzG

Gene

ytzG

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

RNA uridine = RNA pseudouridine.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei103NucleophileBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomerase, RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized RNA pseudouridine synthase YtzG (EC:5.4.99.-)
Alternative name(s):
RNA pseudouridylate synthase
RNA-uridine isomerase
Gene namesi
Name:ytzG
Synonyms:ytzF
Ordered Locus Names:BSU30035
ORF Names:BSU30030, BSU30040
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001000241 – 239Uncharacterized RNA pseudouridine synthase YtzGAdd BLAST239

Proteomic databases

PRIDEiO32068

Structurei

3D structure databases

ProteinModelPortaliO32068
SMRiO32068
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 65S4 RNA-bindingPROSITE-ProRule annotationAdd BLAST65

Sequence similaritiesi

Belongs to the pseudouridine synthase RsuA family.Curated

Phylogenomic databases

HOGENOMiHOG000044954
InParanoidiO32068
KOiK06183
OMAiSQGFGTR
PhylomeDBiO32068

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR000748 PsdUridine_synth_RsuA/RluB/E/F
IPR018496 PsdUridine_synth_RsuA/RluB_CS
IPR006145 PsdUridine_synth_RsuA/RluD
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PANTHERiPTHR21600 PTHR21600, 1 hit
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
PF01479 S4, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00093 TIGR00093, 1 hit
PROSITEiView protein in PROSITE
PS01149 PSI_RSU, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

O32068-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLDKLLANS GYGSRKEVKA VVKAGAVMID GKPAKDVKEH VDPDTQEVTV
60 70 80 90 100
YGEPVDYREF IYLMMNKPQG VLSATEDSRQ QTVVDLLTPE EMRFEPFPAG
110 120 130 140 150
RLDKDTEGFL LLTNDGQLAH RLLSPKKHVP KTYEVHLKSQ ISREDISDLE
160 170 180 190 200
TGVYIEGGYK TKPAKAEIKT NDSGNTVIYL TITEGKYHQV KQMAKAVGNE
210 220 230
VVYLKRLSMG RVSLDPALAP GEYRELTEEE LHLLNEPQA
Length:239
Mass (Da):26,790
Last modified:November 24, 2009 - v2
Checksum:i2B4912819817C86B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA Translation: CAB14982.2
PIRiH70004
RefSeqiNP_390882.2, NC_000964.3
WP_003229226.1, NZ_JNCM01000036.1

Genome annotation databases

EnsemblBacteriaiCAB14982; CAB14982; BSU30035
GeneIDi936165
KEGGibsu:BSU30035
PATRICifig|224308.179.peg.3261

Similar proteinsi

Entry informationi

Entry nameiYTZG_BACSU
AccessioniPrimary (citable) accession number: O32068
Secondary accession number(s): O32069
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: November 24, 2009
Last modified: May 23, 2018
This is version 107 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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