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O31923

- YOQO_BACSU

UniProt

O31923 - YOQO_BACSU

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Protein

SPBc2 prophage-derived uncharacterized protein YoqO

Gene
yoqO, BSU20560
Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU20560-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
SPBc2 prophage-derived uncharacterized protein YoqO
Gene namesi
Name:yoqO
Ordered Locus Names:BSU20560
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570: Chromosome

Organism-specific databases

GenoListiBSU20560.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei54 – 7421Helical; Reviewed predictionAdd
BLAST
Transmembranei88 – 10821Helical; Reviewed predictionAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 124124SPBc2 prophage-derived uncharacterized protein YoqOPRO_0000360472Add
BLAST

Proteomic databases

PaxDbiO31923.

Interactioni

Protein-protein interaction databases

STRINGi224308.BSU20560.

Structurei

3D structure databases

ProteinModelPortaliO31923.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG130774.
HOGENOMiHOG000008983.
OMAiISIMKFI.
OrthoDBiEOG63VC2T.

Family and domain databases

InterProiIPR025621. YoqO.
[Graphical view]
PfamiPF14037. YoqO. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O31923-1 [UniParc]FASTAAdd to Basket

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MSKTIGITGF FLSIVVQSFS ANDSLSHKIA TGLLFVSIAI YNFDHAKDYS    50
KASLVVICLT FFVLALGIHK LLSFSSDLFD NVNINFGVIF ILQITLIIGS 100
VAIAISIMKF ICDRLKKKPN GKEC 124
Length:124
Mass (Da):13,595
Last modified:January 1, 1998 - v1
Checksum:iCC92515FB6CAE4B4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL009126 Genomic DNA. Translation: CAB13948.1.
RefSeqiNP_389938.1. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB13948; CAB13948; BSU20560.
GeneIDi936492.
KEGGibsu:BSU20560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL009126 Genomic DNA. Translation: CAB13948.1 .
RefSeqi NP_389938.1. NC_000964.3.

3D structure databases

ProteinModelPortali O31923.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224308.BSU20560.

Proteomic databases

PaxDbi O31923.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB13948 ; CAB13948 ; BSU20560 .
GeneIDi 936492.
KEGGi bsu:BSU20560.

Organism-specific databases

GenoListi BSU20560.

Phylogenomic databases

eggNOGi NOG130774.
HOGENOMi HOG000008983.
OMAi ISIMKFI.
OrthoDBi EOG63VC2T.

Enzyme and pathway databases

BioCyci BSUB:BSU20560-MONOMER.

Family and domain databases

InterProi IPR025621. YoqO.
[Graphical view ]
Pfami PF14037. YoqO. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiYOQO_BACSU
AccessioniPrimary (citable) accession number: O31923
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: May 14, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

External Data

Dasty 3

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