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Protein

SPBc2 prophage-derived DNA ligase-like protein LigB

Gene

ligB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei25N6-AMP-lysine intermediateBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigase
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciBSUB:BSU20500-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
SPBc2 prophage-derived DNA ligase-like protein LigB
Gene namesi
Name:ligB
Synonyms:yoqV
Ordered Locus Names:BSU20500
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003605151 – 270SPBc2 prophage-derived DNA ligase-like protein LigBAdd BLAST270

Proteomic databases

PaxDbiO31917
PRIDEiO31917

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100011316

Structurei

3D structure databases

ProteinModelPortaliO31917
SMRiO31917
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.Curated

Phylogenomic databases

eggNOGiENOG4108J9Q Bacteria
COG1793 LUCA
HOGENOMiHOG000049932
InParanoidiO31917
KOiK10747
OMAiSFMIVGY
PhylomeDBiO31917

Family and domain databases

InterProiView protein in InterPro
IPR012310 DNA_ligase_ATP-dep_cent
PfamiView protein in Pfam
PF01068 DNA_ligase_A_M, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

O31917-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFVSPMLLHS IKEPFNDENY ITELKFDGIR LILSKFDNQI KLYTRHNNEV
60 70 80 90 100
TSKFPELMDL DIPDGTVLDG EVIVAASGGA PDFEAVMERF MSKKSAHNIV
110 120 130 140 150
YCVFDVIYKD GQSIAAKPLT ERKTVLNSLE LDHPNVFVIE GTQGNGLAYF
160 170 180 190 200
NLAKEKNLEG IVIKKANSPY EINKRSHNWL KVINYDYTEV LITGYTKKDI
210 220 230 240 250
KFLLSYPDGT SAGFMEFMPH AERTKFHSMK QVKSESDEYV FIEPILCNVK
260 270
HRFKTKHGKL RIPSFESWRV
Length:270
Mass (Da):31,027
Last modified:January 1, 1998 - v1
Checksum:iA5667596F87E6355
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA Translation: CAB13942.1
RefSeqiNP_389932.1, NC_000964.3
WP_004399261.1, NZ_JNCM01000036.1

Genome annotation databases

EnsemblBacteriaiCAB13942; CAB13942; BSU20500
GeneIDi939992
KEGGibsu:BSU20500
PATRICifig|224308.179.peg.2240

Similar proteinsi

Entry informationi

Entry nameiLIGB_BACSU
AccessioniPrimary (citable) accession number: O31917
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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