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Protein

SPBc2 prophage-derived uncharacterized protein YorR

Gene

yorR

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU20280-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
SPBc2 prophage-derived uncharacterized protein YorR
Gene namesi
Name:yorR
Ordered Locus Names:BSU20280
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003606351 – 165SPBc2 prophage-derived uncharacterized protein YorRAdd BLAST165

Proteomic databases

PaxDbiO31896.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100011206.

Structurei

Secondary structure

1165
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi3 – 7Combined sources5
Beta strandi9 – 13Combined sources5
Helixi14 – 25Combined sources12
Beta strandi29 – 31Combined sources3
Helixi35 – 38Combined sources4
Helixi42 – 52Combined sources11
Beta strandi57 – 62Combined sources6
Helixi64 – 70Combined sources7
Turni71 – 73Combined sources3
Beta strandi74 – 76Combined sources3
Helixi82 – 92Combined sources11
Turni93 – 95Combined sources3
Beta strandi96 – 102Combined sources7
Helixi105 – 115Combined sources11
Helixi122 – 137Combined sources16
Beta strandi143 – 147Combined sources5
Turni148 – 150Combined sources3
Helixi153 – 165Combined sources13

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2AXPX-ray2.50A/B1-165[»]
3KB2X-ray2.20A/B1-165[»]
ProteinModelPortaliO31896.
SMRiO31896.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO31896.

Family & Domainsi

Phylogenomic databases

InParanoidiO31896.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

O31896-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLIILEGPD CCFKSTVAAK LSKELKYPII KGSSFELAKS GNEKLFEHFN
60 70 80 90 100
KLADEDNVII DRFVYSNLVY AKKFKDYSIL TERQLRFIED KIKAKAKVVY
110 120 130 140 150
LHADPSVIKK RLRVRGDEYI EGKDIDSILE LYREVMSNAG LHTYSWDTGQ
160
WSSDEIAKDI IFLVE
Length:165
Mass (Da):19,064
Last modified:January 1, 1998 - v1
Checksum:i6CDE7E759E1DFF50
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB13920.1.
RefSeqiNP_389910.1. NC_000964.3.
WP_004399428.1. NZ_JNCM01000036.1.

Genome annotation databases

EnsemblBacteriaiCAB13920; CAB13920; BSU20280.
GeneIDi939530.
KEGGibsu:BSU20280.
PATRICi18975897. VBIBacSub10457_2139.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB13920.1.
RefSeqiNP_389910.1. NC_000964.3.
WP_004399428.1. NZ_JNCM01000036.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2AXPX-ray2.50A/B1-165[»]
3KB2X-ray2.20A/B1-165[»]
ProteinModelPortaliO31896.
SMRiO31896.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100011206.

Proteomic databases

PaxDbiO31896.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB13920; CAB13920; BSU20280.
GeneIDi939530.
KEGGibsu:BSU20280.
PATRICi18975897. VBIBacSub10457_2139.

Phylogenomic databases

InParanoidiO31896.

Enzyme and pathway databases

BioCyciBSUB:BSU20280-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO31896.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYORR_BACSU
AccessioniPrimary (citable) accession number: O31896
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.