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O31813 (YNDJ_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized membrane protein YndJ
Gene names
Name:yndJ
Ordered Locus Names:BSU17800
OrganismBacillus subtilis (strain 168) [Reference proteome] [HAMAP]
Taxonomic identifier224308 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length546 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Ontologies

Keywords
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 546546Uncharacterized membrane protein YndJ
PRO_0000370256

Regions

Transmembrane27 – 4620Helical; Potential
Transmembrane59 – 7820Helical; Potential
Transmembrane83 – 10018Helical; Potential
Transmembrane114 – 13421Helical; Potential
Transmembrane143 – 16321Helical; Potential
Transmembrane176 – 19621Helical; Potential
Transmembrane204 – 22421Helical; Potential
Transmembrane237 – 25721Helical; Potential
Transmembrane268 – 28821Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
O31813 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: A47CDC4ABBF64F65

FASTA54662,471
        10         20         30         40         50         60 
MKRNGIVSAL CFIGFLAAEA PDISVAEALV LLSILFFVPG IFPFVFRQSP VRAAQFMENG 

        70         80         90        100        110        120 
LIQCYPVAAF FAVLALVTEV GGFALIWWMY TVFNALYAIL RLWETKIHRI EETSVLFGLI 

       130        140        150        160        170        180 
YLAGGGFWFF AYAAHLQIMQ FGPLIILLTA VHFHYSAFLI PIFNGLLGRT IRKHRMLYSW 

       190        200        210        220        230        240 
ITWVILLSPL LIALGITYSK TLDVIAVSIY MAAIYLHAFL VFTAAFRTKT GTFLIRLSSA 

       250        260        270        280        290        300 
VLMITIAFSM IYSFGVFRQE VTLTINQMIW IHGFVNAFGV ILPALIGWRI EDAKPFDADS 

       310        320        330        340        350        360 
VKTFSRIYGK RKIGEEFLAN IQAENNARYS GLVDDMGSLR SKDFSPEKLA PLILSFYEQT 

       370        380        390        400        410        420 
IEYNIKAKVT WSTWFRPLAI IYEWFSRRIG QIHLSTNPDW YRMYSKIKGV HSKKDGRERV 

       430        440        450        460        470        480 
RAWIRTNEKN ETIFTALYSV YRSNGEGYMN ISLPLPFSSM TGILKPYHHQ EKLVLTSRRR 

       490        500        510        520        530        540 
KSRAGDEGIY LQTRAGTCPL PLSETFLIEA VHDNKLTAVH HMWLFGIKFL TVHYSITHIN 


QPIERT 

« Hide

References

[1]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL009126 Genomic DNA. Translation: CAB13664.1.
PIRA69890.
RefSeqNP_389663.1. NC_000964.3.

3D structure databases

ProteinModelPortalO31813.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224308.BSU17800.

Protein family/group databases

TCDB9.B.102.7.5. the yede/yeee (yede/yeee) family.

Proteomic databases

PaxDbO31813.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB13664; CAB13664; BSU17800.
GeneID939575.
KEGGbsu:BSU17800.
PATRIC18975387. VBIBacSub10457_1885.

Organism-specific databases

GenoListBSU17800.

Phylogenomic databases

eggNOGNOG20109.
HOGENOMHOG000087774.
OMALMVTIMF.
OrthoDBEOG6BCSR9.

Enzyme and pathway databases

BioCycBSUB:BSU17800-MONOMER.

Family and domain databases

InterProIPR025450. YndJ-like.
[Graphical view]
PfamPF14158. YndJ. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYNDJ_BACSU
AccessionPrimary (citable) accession number: O31813
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: January 1, 1998
Last modified: May 14, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList