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Protein

Spore germination protein YndE

Gene

yndE

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Involved in the germinative response to L-alanine. Could be an amino acid transporter (By similarity).By similarity1 Publication

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processAmino-acid transport, Germination, Transport

Enzyme and pathway databases

BioCyciBSUB:BSU17760-MONOMER

Protein family/group databases

TCDBi2.A.3.9.4 the amino acid-polyamine-organocation (apc) family

Names & Taxonomyi

Protein namesi
Recommended name:
Spore germination protein YndE
Gene namesi
Name:yndE
Ordered Locus Names:BSU17760
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei8 – 28HelicalSequence analysisAdd BLAST21
Transmembranei41 – 61HelicalSequence analysisAdd BLAST21
Transmembranei84 – 104HelicalSequence analysisAdd BLAST21
Transmembranei113 – 133HelicalSequence analysisAdd BLAST21
Transmembranei149 – 169HelicalSequence analysisAdd BLAST21
Transmembranei189 – 209HelicalSequence analysisAdd BLAST21
Transmembranei218 – 238HelicalSequence analysisAdd BLAST21
Transmembranei273 – 293HelicalSequence analysisAdd BLAST21
Transmembranei305 – 325HelicalSequence analysisAdd BLAST21
Transmembranei335 – 355HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003601561 – 363Spore germination protein YndEAdd BLAST363

Proteomic databases

PaxDbiO31809
PRIDEiO31809

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100009786

Structurei

3D structure databases

ProteinModelPortaliO31809
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108Q8B Bacteria
ENOG4110XW1 LUCA
HOGENOMiHOG000009099
InParanoidiO31809
KOiK06311
OMAiAKAVMVN
PhylomeDBiO31809

Family and domain databases

InterProiView protein in InterPro
IPR002293 AA/rel_permease1
IPR004761 Spore_GerAB
PANTHERiPTHR34975 PTHR34975, 1 hit
PfamiView protein in Pfam
PF03845 Spore_permease, 1 hit
PIRSFiPIRSF006060 AA_transporter, 1 hit
TIGRFAMsiTIGR00912 2A0309, 1 hit

Sequencei

Sequence statusi: Complete.

O31809-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFSPTSKITT AQATIIIINY MLAAGVLTLP RTVTEQTQSP DGWISVLLGG
60 70 80 90 100
VLAVIAGMII AKLSQQYPKE TFYEYSRHIV GKWLGHLISI VFITYFLALG
110 120 130 140 150
AFEVRVMSEI VDFFLLEGTP SWAIIMTVLW IGLYSITQGL DPIARLFEMI
160 170 180 190 200
FPITVIIFLT IALMSLGIFE INNLRPVLGD GIMPVLRGVK TTNLSFTCSE
210 220 230 240 250
IMFILVAFMK KPKNAVKAVV IGTGVVTSFY MITMIMVIGA LSVEGVVTRT
260 270 280 290 300
WPGLDLMRSF EIPGLIFERF ESFLLVIWIM QLFATFIITF YAASLGVSQV
310 320 330 340 350
FKKKPLSCMF GLLPVIYILS CMPKNENDVF ILGDTVSHIA LYIFGALPIL
360
LLVISKWRKR GEK
Length:363
Mass (Da):40,471
Last modified:January 1, 1998 - v1
Checksum:i1F69D5E3EF312EB5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA Translation: CAB13660.1
PIRiE69889
RefSeqiNP_389659.1, NC_000964.3
WP_003231622.1, NZ_JNCM01000035.1

Genome annotation databases

EnsemblBacteriaiCAB13660; CAB13660; BSU17760
GeneIDi936538
KEGGibsu:BSU17760
PATRICifig|224308.179.peg.1936

Similar proteinsi

Entry informationi

Entry nameiYNDE_BACSU
AccessioniPrimary (citable) accession number: O31809
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

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