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O31803

- YNCM_BACSU

UniProt

O31803 - YNCM_BACSU

Protein

Uncharacterized protein YncM

Gene

yncM

Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 1 (01 Jan 1998)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciBSUB:BSU17690-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein YncM
    Gene namesi
    Name:yncM
    Ordered Locus Names:BSU17690
    OrganismiBacillus subtilis (strain 168)
    Taxonomic identifieri224308 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000001570: Chromosome

    Organism-specific databases

    GenoListiBSU17690.

    Subcellular locationi

    Secreted 1 Publication

    GO - Cellular componenti

    1. extracellular region Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 47471 PublicationAdd
    BLAST
    Chaini48 – 250203Uncharacterized protein YncMPRO_0000049646Add
    BLAST

    Proteomic databases

    PaxDbiO31803.

    Interactioni

    Protein-protein interaction databases

    STRINGi224308.BSU17690.

    Structurei

    Secondary structure

    1
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi54 – 618
    Beta strandi66 – 738
    Beta strandi82 – 843
    Beta strandi86 – 9510
    Beta strandi100 – 1089
    Turni109 – 1124
    Beta strandi113 – 1208
    Beta strandi127 – 1304
    Helixi132 – 1354
    Beta strandi146 – 15510
    Beta strandi158 – 16710
    Beta strandi172 – 1798
    Beta strandi187 – 19711
    Helixi201 – 2066
    Beta strandi209 – 22012
    Beta strandi228 – 23912
    Beta strandi244 – 2507

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4HFSX-ray1.55A/B40-250[»]
    ProteinModelPortaliO31803.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    To B.subtilis YrpD.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiNOG134349.
    HOGENOMiHOG000008839.
    OMAiMTIYKNL.

    Family and domain databases

    InterProiIPR029143. YrpD.
    [Graphical view]
    PfamiPF15493. YrpD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    O31803-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKPLSKGGI LVKKVLIAGA VGTAVLFGTL SSGIPGLPAA DAQVAKAASE    50
    LPNGIGGRVY LNSTGAVFTA KIVLPETVKN NDSVSTPYIY SGFRATSGTE 100
    ADIGLQYSKQ YNVWKPLMKV GSKNEETYIE GKDKFTYNKG FRPGSTVQMT 150
    IYKNLSGNTR MTLWGTNNDG YTGRIITEIQ GTNIGTISKW KTLATAAVSY 200
    ESQRDAIKAT FSTSFNNITI DNKAVTPVVD TQDFAKVSVA GNNVTISVNK 250
    Length:250
    Mass (Da):26,597
    Last modified:January 1, 1998 - v1
    Checksum:iC2DA923F71AF33DE
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti54 – 552GI → CD AA sequence (PubMed:10658653)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL009126 Genomic DNA. Translation: CAB13653.1.
    PIRiA69889.
    RefSeqiNP_389652.1. NC_000964.3.

    Genome annotation databases

    EnsemblBacteriaiCAB13653; CAB13653; BSU17690.
    GeneIDi939576.
    KEGGibsu:BSU17690.
    PATRICi18975361. VBIBacSub10457_1872.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL009126 Genomic DNA. Translation: CAB13653.1 .
    PIRi A69889.
    RefSeqi NP_389652.1. NC_000964.3.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4HFS X-ray 1.55 A/B 40-250 [» ]
    ProteinModelPortali O31803.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224308.BSU17690.

    Proteomic databases

    PaxDbi O31803.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAB13653 ; CAB13653 ; BSU17690 .
    GeneIDi 939576.
    KEGGi bsu:BSU17690.
    PATRICi 18975361. VBIBacSub10457_1872.

    Organism-specific databases

    GenoListi BSU17690.

    Phylogenomic databases

    eggNOGi NOG134349.
    HOGENOMi HOG000008839.
    OMAi MTIYKNL.

    Enzyme and pathway databases

    BioCyci BSUB:BSU17690-MONOMER.

    Family and domain databases

    InterProi IPR029143. YrpD.
    [Graphical view ]
    Pfami PF15493. YrpD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
      Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
      , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
      Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 168.
    2. "Proteome analysis of Bacillus subtilis extracellular proteins: a two-dimensional protein electrophoretic study."
      Hirose I., Sano K., Shioda I., Kumano M., Nakamura K., Yamane K.
      Microbiology 146:65-75(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 48-58, SUBCELLULAR LOCATION.
      Strain: 168.

    Entry informationi

    Entry nameiYNCM_BACSU
    AccessioniPrimary (citable) accession number: O31803
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 1998
    Last sequence update: January 1, 1998
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. Bacillus subtilis
      Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
    2. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references

    External Data

    Dasty 3