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O31803 (YNCM_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YncM
Gene names
Name:yncM
Ordered Locus Names:BSU17690
OrganismBacillus subtilis (strain 168) [Reference proteome] [HAMAP]
Taxonomic identifier224308 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length250 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Subcellular location

Secreted Ref.2.

Sequence similarities

To B.subtilis YrpD.

Ontologies

Keywords
   Cellular componentSecreted
   DomainSignal
   Technical term3D-structure
Complete proteome
Direct protein sequencing
Reference proteome
Gene Ontology (GO)
   Cellular_componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4747 Ref.2
Chain48 – 250203Uncharacterized protein YncM
PRO_0000049646

Experimental info

Sequence conflict54 – 552GI → CD AA sequence Ref.2

Secondary structure

................................ 250
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
O31803 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: C2DA923F71AF33DE

FASTA25026,597
        10         20         30         40         50         60 
MAKPLSKGGI LVKKVLIAGA VGTAVLFGTL SSGIPGLPAA DAQVAKAASE LPNGIGGRVY 

        70         80         90        100        110        120 
LNSTGAVFTA KIVLPETVKN NDSVSTPYIY SGFRATSGTE ADIGLQYSKQ YNVWKPLMKV 

       130        140        150        160        170        180 
GSKNEETYIE GKDKFTYNKG FRPGSTVQMT IYKNLSGNTR MTLWGTNNDG YTGRIITEIQ 

       190        200        210        220        230        240 
GTNIGTISKW KTLATAAVSY ESQRDAIKAT FSTSFNNITI DNKAVTPVVD TQDFAKVSVA 

       250 
GNNVTISVNK 

« Hide

References

« Hide 'large scale' references
[1]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.
[2]"Proteome analysis of Bacillus subtilis extracellular proteins: a two-dimensional protein electrophoretic study."
Hirose I., Sano K., Shioda I., Kumano M., Nakamura K., Yamane K.
Microbiology 146:65-75(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: PROTEIN SEQUENCE OF 48-58, SUBCELLULAR LOCATION.
Strain: 168.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL009126 Genomic DNA. Translation: CAB13653.1.
PIRA69889.
RefSeqNP_389652.1. NC_000964.3.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4HFSX-ray1.55A/B40-250[»]
ProteinModelPortalO31803.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224308.BSU17690.

Proteomic databases

PaxDbO31803.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB13653; CAB13653; BSU17690.
GeneID939576.
KEGGbsu:BSU17690.
PATRIC18975361. VBIBacSub10457_1872.

Organism-specific databases

GenoListBSU17690.

Phylogenomic databases

eggNOGNOG134349.
HOGENOMHOG000008839.
OMAMTIYKNL.

Enzyme and pathway databases

BioCycBSUB:BSU17690-MONOMER.

Family and domain databases

InterProIPR029143. YrpD.
[Graphical view]
PfamPF15493. YrpD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYNCM_BACSU
AccessionPrimary (citable) accession number: O31803
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 1, 1998
Last modified: June 11, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList