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O31803

- YNCM_BACSU

UniProt

O31803 - YNCM_BACSU

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Protein
Uncharacterized protein YncM
Gene
yncM, BSU17690
Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU17690-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YncM
Gene namesi
Name:yncM
Ordered Locus Names:BSU17690
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570: Chromosome

Organism-specific databases

GenoListiBSU17690.

Subcellular locationi

Secreted 1 Publication

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 47471 Publication
Add
BLAST
Chaini48 – 250203Uncharacterized protein YncM
PRO_0000049646Add
BLAST

Proteomic databases

PaxDbiO31803.

Interactioni

Protein-protein interaction databases

STRINGi224308.BSU17690.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi54 – 618
Beta strandi66 – 738
Beta strandi82 – 843
Beta strandi86 – 9510
Beta strandi100 – 1089
Turni109 – 1124
Beta strandi113 – 1208
Beta strandi127 – 1304
Helixi132 – 1354
Beta strandi146 – 15510
Beta strandi158 – 16710
Beta strandi172 – 1798
Beta strandi187 – 19711
Helixi201 – 2066
Beta strandi209 – 22012
Beta strandi228 – 23912
Beta strandi244 – 2507

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4HFSX-ray1.55A/B40-250[»]
ProteinModelPortaliO31803.

Family & Domainsi

Sequence similaritiesi

To B.subtilis YrpD.

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG134349.
HOGENOMiHOG000008839.
OMAiMTIYKNL.

Family and domain databases

InterProiIPR029143. YrpD.
[Graphical view]
PfamiPF15493. YrpD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O31803-1 [UniParc]FASTAAdd to Basket

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MAKPLSKGGI LVKKVLIAGA VGTAVLFGTL SSGIPGLPAA DAQVAKAASE    50
LPNGIGGRVY LNSTGAVFTA KIVLPETVKN NDSVSTPYIY SGFRATSGTE 100
ADIGLQYSKQ YNVWKPLMKV GSKNEETYIE GKDKFTYNKG FRPGSTVQMT 150
IYKNLSGNTR MTLWGTNNDG YTGRIITEIQ GTNIGTISKW KTLATAAVSY 200
ESQRDAIKAT FSTSFNNITI DNKAVTPVVD TQDFAKVSVA GNNVTISVNK 250
Length:250
Mass (Da):26,597
Last modified:January 1, 1998 - v1
Checksum:iC2DA923F71AF33DE
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti54 – 552GI → CD AA sequence 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL009126 Genomic DNA. Translation: CAB13653.1.
PIRiA69889.
RefSeqiNP_389652.1. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB13653; CAB13653; BSU17690.
GeneIDi939576.
KEGGibsu:BSU17690.
PATRICi18975361. VBIBacSub10457_1872.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL009126 Genomic DNA. Translation: CAB13653.1 .
PIRi A69889.
RefSeqi NP_389652.1. NC_000964.3.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4HFS X-ray 1.55 A/B 40-250 [» ]
ProteinModelPortali O31803.
ModBasei Search...

Protein-protein interaction databases

STRINGi 224308.BSU17690.

Proteomic databases

PaxDbi O31803.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB13653 ; CAB13653 ; BSU17690 .
GeneIDi 939576.
KEGGi bsu:BSU17690.
PATRICi 18975361. VBIBacSub10457_1872.

Organism-specific databases

GenoListi BSU17690.

Phylogenomic databases

eggNOGi NOG134349.
HOGENOMi HOG000008839.
OMAi MTIYKNL.

Enzyme and pathway databases

BioCyci BSUB:BSU17690-MONOMER.

Family and domain databases

InterProi IPR029143. YrpD.
[Graphical view ]
Pfami PF15493. YrpD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  2. "Proteome analysis of Bacillus subtilis extracellular proteins: a two-dimensional protein electrophoretic study."
    Hirose I., Sano K., Shioda I., Kumano M., Nakamura K., Yamane K.
    Microbiology 146:65-75(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 48-58, SUBCELLULAR LOCATION.
    Strain: 168.

Entry informationi

Entry nameiYNCM_BACSU
AccessioniPrimary (citable) accession number: O31803
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 1, 1998
Last modified: June 11, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

External Data

Dasty 3

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