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Protein

Uncharacterized protein YmzC

Gene

ymzC

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU17350-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YmzC
Gene namesi
Name:ymzC
Ordered Locus Names:BSU17350
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570 Componenti: Chromosome

Organism-specific databases

GenoListiBSU17350.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626Sequence AnalysisAdd
BLAST
Chaini27 – 9064Uncharacterized protein YmzCPRO_0000013714Add
BLAST

Proteomic databases

PaxDbiO31797.

Interactioni

Protein-protein interaction databases

STRINGi224308.BSU17350.

Structurei

Secondary structure

1
90
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi49 – 524Combined sources
Beta strandi57 – 626Combined sources
Beta strandi65 – 728Combined sources
Turni73 – 764Combined sources
Beta strandi77 – 859Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3KVPX-ray2.40A/B/C/D/E/F28-90[»]
SMRiO31797. Positions 46-88.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO31797.

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG120591.
HOGENOMiHOG000008936.
OMAiRIALVWI.
OrthoDBiEOG6Q2SVS.

Family and domain databases

InterProiIPR025448. YmzC-like.
[Graphical view]
PfamiPF14157. YmzC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O31797-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFESEAELRR IRIALVWIAV FLLFGACGNQ DTIIETDNGN SDYETPQPTS
60 70 80 90
FPLEHNHFGV MEDGYIKIYE YNESRNEVKL KKEYADDELE
Length:90
Mass (Da):10,509
Last modified:January 1, 1998 - v1
Checksum:i8413887E447B1F13
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB13619.1.
PIRiA69887.
RefSeqiNP_389617.1. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB13619; CAB13619; BSU17350.
GeneIDi940085.
KEGGibsu:BSU17350.
PATRICi18975281. VBIBacSub10457_1832.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB13619.1.
PIRiA69887.
RefSeqiNP_389617.1. NC_000964.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3KVPX-ray2.40A/B/C/D/E/F28-90[»]
SMRiO31797. Positions 46-88.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.BSU17350.

Proteomic databases

PaxDbiO31797.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB13619; CAB13619; BSU17350.
GeneIDi940085.
KEGGibsu:BSU17350.
PATRICi18975281. VBIBacSub10457_1832.

Organism-specific databases

GenoListiBSU17350.

Phylogenomic databases

eggNOGiNOG120591.
HOGENOMiHOG000008936.
OMAiRIALVWI.
OrthoDBiEOG6Q2SVS.

Enzyme and pathway databases

BioCyciBSUB:BSU17350-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO31797.

Family and domain databases

InterProiIPR025448. YmzC-like.
[Graphical view]
PfamiPF14157. YmzC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiYMZC_BACSU
AccessioniPrimary (citable) accession number: O31797
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 25, 2003
Last sequence update: January 1, 1998
Last modified: April 1, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.