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Protein

Uncharacterized protein YmcA

Gene

ymcA

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

May work together with YlbF to regulate community development.1 Publication

Enzyme and pathway databases

BioCyciBSUB:BSU17020-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YmcA
Gene namesi
Name:ymcA
Ordered Locus Names:BSU17020
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000496331 – 143Uncharacterized protein YmcAAdd BLAST143

Proteomic databases

PaxDbiO31779
PRIDEiO31779

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100009361

Structurei

Secondary structure

1143
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi6 – 20Combined sources15
Helixi24 – 38Combined sources15
Helixi40 – 61Combined sources22
Helixi65 – 84Combined sources20
Helixi86 – 120Combined sources35

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2PIHX-ray2.10A/B1-143[»]
ProteinModelPortaliO31779
SMRiO31779
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO31779

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4550 LUCA
HOGENOMiHOG000011010
OMAiSHLAGQM
PhylomeDBiO31779

Family and domain databases

Gene3Di1.20.1500.10, 1 hit
InterProiView protein in InterPro
IPR016783 Biofilm_formation_YmcA
IPR010368 Com_YlbF
IPR023378 YheA/YmcA-like_dom_sf
PfamiView protein in Pfam
PF06133 Com_YlbF, 1 hit
PIRSFiPIRSF021287 Biofilm_formation_YmcA, 1 hit
SUPFAMiSSF158622 SSF158622, 1 hit

Sequencei

Sequence statusi: Complete.

O31779-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLYSKKDIV QQARNLAKMI SETEEVDFFK RAEAQINEND KVSTIVNQIK
60 70 80 90 100
ALQKQAVNLK HYEKHEALKQ VEAKIDALQE ELEEIPVIQE FRDSQMEVND
110 120 130 140
LLQLVAHTIS NQVTNEIITS TGGDLLKGET GSKVKHSNNS CSL
Length:143
Mass (Da):16,166
Last modified:January 1, 1998 - v1
Checksum:i750A24D99B463C25
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA Translation: CAB13575.1
PIRiC69884
RefSeqiNP_389584.1, NC_000964.3
WP_003231834.1, NZ_JNCM01000035.1

Genome annotation databases

EnsemblBacteriaiCAB13575; CAB13575; BSU17020
GeneIDi939581
KEGGibsu:BSU17020
PATRICifig|224308.179.peg.1843

Similar proteinsi

Entry informationi

Entry nameiYMCA_BACSU
AccessioniPrimary (citable) accession number: O31779
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 1, 2005
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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